RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GRAMD4Q6IC98 578 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 UBR3Q6ZT12 1888 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 UNC5BQ8IZJ1 945 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 RNF148Q8N7C7 305 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 TMEM102Q8N9M5 508 aaPredicted RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 FNIP1Q8TF40 1166 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 LRRC39Q96DD0 335 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 CEP170P1Q96L14 293 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 SIGLEC10Q96LC7 697 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 KLHL32Q96NJ5 620 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 SDCBP2Q9H190 292 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 RNPEPQ9H4A4 650 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 C7orf72A4D263 438 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 COL6A2P12110 1019 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 ZFXP17010 805 aaPredicted RBP19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 ADORA2AP29274 412 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 NDST2P52849 883 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 NUP107P57740 925 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 CNTN2Q02246 1040 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 DACT2Q5SW24 774 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 EPGNQ6UW88 154 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 C16orf89Q6UX73 402 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 ZNF534Q76KX8 674 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 SNX32Q86XE0 403 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 KYQ8NBH2 561 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 EBNA1BP2Q99848 306 aaKnown RBP19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 NUF2Q9BZD4 464 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 IMPG2Q9BZV3 1241 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 TCEAL9Q9UHQ7 104 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 SQORQ9Y6N5 450 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 SERPINB7O75635 380 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 RALBP11234 206 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 MAGEA3P43357 314 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 CEACAM7Q14002 265 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 ITPRIPL1Q6GPH6 555 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 MAPK15Q8TD08 544 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 VPS50Q96JG6 964 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 ZBTB45Q96K62 511 aaPredicted RBP19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 COPG2Q9UBF2 871 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 CYTH4Q9UIA0 394 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 USP18Q9UMW8 372 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 TMX2Q9Y320 296 aa19.12■□□□□ 0.65
ECHDC1-214ENST00000474289 H0YIN7 160 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 RNASEH2AO75792 299 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CNTFP26441 200 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 RBL1P28749 1068 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PSMD7P51665 324 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 TXNL4AP83876 142 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 RELAQ04206 551 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PODNQ7Z5L7 613 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 ZNF781Q8N8C0 355 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 ACMSDQ8TDX5 336 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 USP13Q92995 863 aaPredicted RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 OR52B2Q96RD2 323 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CGRRF1Q99675 332 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 GCOM2Q9BZD3 368 aaPredicted RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CAAP1Q9H8G2 361 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CISHQ9NSE2 258 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 SCN9AQ15858 1988 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 NOP56O00567 594 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 NFIBO00712 420 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 MAP3K6O95382 1288 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 TRUB2O95900 331 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CST3P01034 146 aaPredicted RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PIK3R1P27986 724 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 MAGEA6P43360 314 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CDH6P55285 790 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PSMC1P62191 440 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 DENND1BQ6P3S1 775 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 TTLL6Q8N841 843 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CHURC1Q8WUH1 139 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PDCD6IPQ8WUM4 868 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 LRRN4Q8WUT4 740 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 DLG3Q92796 817 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 ATP2A3Q93084 1043 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 EME1Q96AY2 570 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PEBP4Q96S96 227 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CYP26B1Q9NR63 512 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 IGSF9Q9P2J2 1179 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CNOT11Q9UKZ1 510 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PCDHGC3Q9UN70 934 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 CLEC11AQ9Y240 323 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 PCDHA11Q9Y5I1 949 aa19.11■□□□□ 0.65
ECHDC1-214ENST00000474289 ARHGEF37A1IGU5 675 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 H3BNH8 94 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 GMPRP36959 345 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 ACADVLP49748 655 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 JAK3P52333 1124 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 TGFBIQ15582 683 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 MGAT5BQ3V5L5 792 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 PDCD4Q53EL6 469 aaKnown RBP19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 MEX3CQ5U5Q3 659 aaKnown RBP19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 RTP4Q96DX8 246 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 MOCS1Q9NZB8 636 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 TMEM216Q9P0N5 145 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 EBF1Q9UH73 591 aa19.1■□□□□ 0.65
ECHDC1-214ENST00000474289 BCAP29Q9UHQ4 241 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms