RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ATMQ13315 3056 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
TRAF4-209ENST00000473421 GABBR2O75899 941 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 CD27P26842 260 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 CD70P32970 193 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 GRK6P43250 576 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 PSEN1P49768 467 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 CCT8P50990 548 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 VAMP7P51809 220 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 RAD23BP54727 409 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
TRAF4-209ENST00000473421 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 PCSK4Q6UW60 755 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 SLC4A11Q8NBS3 891 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 EDEM1Q92611 657 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 HEXIM2Q96MH2 286 aaKnown RBP13.18□□□□□ -0.3
TRAF4-209ENST00000473421 SLC2A11Q9BYW1 496 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 ULBP1Q9BZM6 244 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 PCED1AQ9H1Q7 454 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-209ENST00000473421 PRORYQ9H606 182 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 OSGEPQ9NPF4 335 aa13.18□□□□□ -0.3
TRAF4-209ENST00000473421 ARID1BQ8NFD5 2236 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-209ENST00000473421 A0A1B0GTQ1 180 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 IKBKBO14920 756 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
TRAF4-209ENST00000473421 CYBBP04839 570 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
TRAF4-209ENST00000473421 ABCG1P45844 678 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 TKTL1P51854 596 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 SEMG2Q02383 582 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
TRAF4-209ENST00000473421 RESP18Q5W5W9 173 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 TMEM174Q8WUU8 243 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 SLC39A7Q92504 469 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 TATDN2Q93075 761 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 LMLNQ96KR4 655 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 NIF3L1Q9GZT8 377 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 BTBD1Q9H0C5 482 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 CYP3A43Q9HB55 503 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 GGA2Q9UJY4 613 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 TENM4Q6N022 2769 aa13.17□□□□□ -0.3
TRAF4-209ENST00000473421 DOCK9Q9BZ29 2069 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
TRAF4-209ENST00000473421 C10orf142B7Z368 130 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 PDXKO00764 312 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 TIMM44O43615 452 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 YEATS4O95619 227 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 PABPC1P11940 636 aaKnown RBP13.16□□□□□ -0.3
TRAF4-209ENST00000473421 SLC6A4P31645 630 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 NUMBP49757 651 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 GALCP54803 685 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 ARID5AQ03989 594 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 BNIP3Q12983 259 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 TARDBPQ13148 414 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAF4-209ENST00000473421 TEAD4Q15561 434 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 MPPE1Q53F39 396 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 MBLAC2Q68D91 279 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
TRAF4-209ENST00000473421 TMPRSS12Q86WS5 348 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAF4-209ENST00000473421 GOLGA5Q8TBA6 731 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 FTSJ1Q9UET6 329 aa13.16□□□□□ -0.3
TRAF4-209ENST00000473421 INTS6Q9UL03 887 aaKnown RBP13.16□□□□□ -0.3
TRAF4-209ENST00000473421 YJEFN3A6XGL0 299 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 E7ENQ6 273 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 ENC1O14682 589 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 VILLO15195 856 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 PAPSS1O43252 624 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-209ENST00000473421 ZBED1O96006 694 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 METAP1P53582 386 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 PDE4CQ08493 712 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 NCEH1Q6PIU2 408 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 TADA2BQ86TJ2 420 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 SAP25Q8TEE9 199 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 PLD4Q96BZ4 506 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 TMA16Q96EY4 203 aaKnown RBP13.15□□□□□ -0.3
TRAF4-209ENST00000473421 CNDP2Q96KP4 475 aaKnown RBP13.15□□□□□ -0.3
TRAF4-209ENST00000473421 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 UBL7Q96S82 380 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-209ENST00000473421 RSPH9Q9H1X1 276 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-209ENST00000473421 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 STOML2Q9UJZ1 356 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 STRIP2Q9ULQ0 834 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
TRAF4-209ENST00000473421 COL5A1P20908 1838 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms