RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GBP5Q96PP8 586 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 TUBGCP5Q96RT8 1024 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 LGMNQ99538 433 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 MTMR10Q9NXD2 777 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 EMCNQ9ULC0 261 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 SNUPNO95149 360 aaKnown RBP21.75■■□□□ 1.07
COL18A1-207ENST00000473212 ATP5BP06576 529 aaKnown RBP21.75■■□□□ 1.07
COL18A1-207ENST00000473212 P4HA1P13674 534 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 RALGPS1Q5JS13 557 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 TEDDM1Q5T9Z0 273 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 N4BP2L1Q5TBK1 243 aaPredicted RBP21.75■■□□□ 1.07
COL18A1-207ENST00000473212 PYDC1Q8WXC3 89 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 C18orf25Q96B23 403 aaPredicted RBP21.75■■□□□ 1.07
COL18A1-207ENST00000473212 HESX1Q9UBX0 185 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 DNAJB4Q9UDY4 337 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 TUBGCP4Q9UGJ1 667 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 PSAT1Q9Y617 370 aa21.75■■□□□ 1.07
COL18A1-207ENST00000473212 BRCA1P38398 1863 aaKnown RBP21.75■■□□□ 1.07
COL18A1-207ENST00000473212 CCDC130P13994 396 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 SLC1A6P48664 564 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 INHBEP58166 350 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 CES3Q6UWW8 571 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 TIFABQ6ZNK6 161 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 NLRP7Q8WX94 980 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 ZNF670Q9BS34 389 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 ASB7Q9H672 318 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 GCATO75600 419 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 PDGFRBP09619 1106 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 FGF3P11487 239 aaPredicted RBP21.74■■□□□ 1.07
COL18A1-207ENST00000473212 LCP1P13796 627 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 TPSB2P20231 275 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 RBP5P82980 135 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 TPSAB1Q15661 275 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 DPY19L2Q6NUT2 758 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 CASC4Q6P4E1 433 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 TP53INP2Q8IXH6 220 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 SLC35F5Q8WV83 523 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 KCTD15Q96SI1 283 aaPredicted RBP21.74■■□□□ 1.07
COL18A1-207ENST00000473212 SHCBP1LQ9BZQ2 653 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 MOCS1Q9NZB8 636 aa21.74■■□□□ 1.07
COL18A1-207ENST00000473212 BUD23O43709 281 aaKnown RBP21.73■■□□□ 1.07
COL18A1-207ENST00000473212 TSPAN1O60635 241 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 FKBP6O75344 327 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 SORBS2O94875 1100 aaKnown RBP21.73■■□□□ 1.07
COL18A1-207ENST00000473212 ALDOAP04075 364 aaKnown RBP21.73■■□□□ 1.07
COL18A1-207ENST00000473212 LGALS2P05162 132 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 GOT1P17174 413 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 ADORA2BP29275 332 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 RBBP5Q15291 538 aaKnown RBP21.73■■□□□ 1.07
COL18A1-207ENST00000473212 LRRC36Q1X8D7 754 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 RABGAP1LQ5R372 815 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 MAF1Q9H063 256 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 S100A14Q9HCY8 104 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 APOBEC2Q9Y235 224 aaKnown RBP21.73■■□□□ 1.07
COL18A1-207ENST00000473212 DPYSL4O14531 572 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 TPP1O14773 563 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 PITX1P78337 314 aaPredicted RBP21.73■■□□□ 1.07
COL18A1-207ENST00000473212 EFHC1Q5JVL4 640 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 RSPH3Q86UC2 560 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 SLC4A5Q9BY07 1137 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 TRIM4Q9C037 500 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 EBF3Q9H4W6 596 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 ERAP1Q9NZ08 941 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 DTLQ9NZJ0 730 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 SORCS3Q9UPU3 1222 aa21.73■■□□□ 1.07
COL18A1-207ENST00000473212 AP1G2O75843 785 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 ARRB2P32121 409 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 GTF2A2P52657 109 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 EPHB1P54762 984 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 SESN2P58004 480 aaPredicted RBP21.72■■□□□ 1.07
COL18A1-207ENST00000473212 PDE1CQ14123 709 aaPredicted RBP21.72■■□□□ 1.07
COL18A1-207ENST00000473212 ZNF618Q5T7W0 954 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 TBCBQ99426 244 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 PNPOQ9NVS9 261 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 AP4E1Q9UPM8 1137 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 BPTFQ12830 3046 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 DNAJC25-GNG10A0A024R161 153 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 SYNJ2BP-COX16A0A087WUM0 186 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 MDM4O15151 490 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 KCTD2Q14681 263 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 PPM1JQ5JR12 505 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 C4orf22Q6V702 233 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 MAVSQ7Z434 540 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 USP6NLQ92738 828 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 CSPG4P5Q96PW8 444 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 ZNF358Q9NW07 568 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 SNTG2Q9NY99 539 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 COX16Q9P0S2 106 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 CSADQ9Y600 493 aa21.72■■□□□ 1.07
COL18A1-207ENST00000473212 SIN3BO75182 1162 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 PDE5AO76074 875 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 LMO2P25791 158 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 RAB27AP51159 221 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 ARHGAP1Q07960 439 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 RNF111Q6ZNA4 994 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 TMEM110Q86TL2 294 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 FAM131BQ86XD5 332 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 EXOC8Q8IYI6 725 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 OR6B3Q8NGW1 331 aa21.71■■□□□ 1.07
COL18A1-207ENST00000473212 ZFAND2BQ8WV99 257 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms