RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CYP4F11Q9HBI6 524 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 CISHQ9NSE2 258 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 SLC38A7Q9NVC3 462 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 GTSE1Q9NYZ3 720 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 TRIM10Q9UDY6 481 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 NOCTQ9UK39 431 aaKnown RBP6.72□□□□□ -1.33
HDAC1-205ENST00000472928 NEUROG3Q9Y4Z2 214 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 NUP205Q92621 2012 aa6.72□□□□□ -1.33
HDAC1-205ENST00000472928 TENM4Q6N022 2769 aa6.71□□□□□ -1.33
HDAC1-205ENST00000472928 KNTC1P50748 2209 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.342e-26■□□□□ 9.7
HDAC1-205ENST00000472928 CDX4O14627 284 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-205ENST00000472928 DCLK1O15075 740 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 THAP12O43422 761 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 HYAL3O43820 417 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-205ENST00000472928 LCA5LO95447 670 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 VNN2O95498 520 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 CEACAM1P13688 526 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 CYP3A5P20815 502 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TNFAIP3P21580 790 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ELF1P32519 619 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TAF6P49848 677 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF132P52740 706 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ARPP19P56211 112 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 FMO1Q01740 532 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TNK2Q07912 1038 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ORC1Q13415 861 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ZBTB6Q15916 424 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 WDR72Q3MJ13 1102 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 SV2CQ496J9 727 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 XKR4Q5GH76 650 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 DNTTIP2Q5QJE6 756 aaKnown RBP6.71□□□□□ -1.34
HDAC1-205ENST00000472928 DAB2IPQ5VWQ8 1189 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TPGS2Q68CL5 300 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 FSTL4Q6MZW2 842 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 LRRC69Q6ZNQ3 347 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 BTLAQ7Z6A9 289 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TXLNBQ8N3L3 684 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 LEMD2Q8NC56 503 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 E2F7Q96AV8 911 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 MMS19Q96T76 1030 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 AGPAT1Q99943 283 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 SYT11Q9BT88 431 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 PACSIN1Q9BY11 444 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TSGA10Q9BZW7 698 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 SDCBP2Q9H190 292 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 SLITRK6Q9H5Y7 841 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ACP6Q9NPH0 428 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ASAH2Q9NR71 780 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM51Q9NW97 253 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 HMGXB4Q9UGU5 601 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 AFF4Q9UHB7 1163 aaKnown RBP6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ADAMTS1Q9UHI8 967 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 KLK13Q9UKR3 277 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 NENFQ9UMX5 172 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 TFR2Q9UP52 801 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 YIPF1Q9Y548 306 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 PCDHA13Q9Y5I0 950 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ADAMTS20P59510 1910 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ATP8B3O60423 1300 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 PTPRQQ9UMZ3 2332 aa6.71□□□□□ -1.34
HDAC1-205ENST00000472928 ANO9A1A5B4 782 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 MACROD2A1Z1Q3 448 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 FIGNL2A6NMB9 653 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TMCO5BA8MYB1 307 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 KIF2AO00139 706 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 PODXLO00592 558 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 SYN3O14994 580 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TRAPPC3O43617 180 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 KRT86O43790 486 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 KIF5CO60282 957 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 PRAMEF12O95522 483 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 RPLP1P05386 114 aaKnown RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 MMEP08473 750 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TNNT1P13805 278 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CYP11B1P15538 503 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TCF3P15923 654 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CHRNB2P17787 502 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 LRPAP1P30533 357 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 PNPLA4P41247 253 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 ARHGAP25P42331 645 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 MAGEA1P43355 309 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 ARSDP51689 593 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 BPIFB4P59827 614 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CDR2Q01850 454 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CREB5Q02930 508 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF394Q53GI3 561 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM196Q5HYL7 178 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CCDC122Q5T0U0 273 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 ALKBH5Q6P6C2 394 aaKnown RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 GAREM2Q75VX8 874 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 PROSER1Q86XN7 944 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 DNAAF5Q86Y56 855 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 PASD1Q8IV76 773 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 ARID3BQ8IVW6 561 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 YAF2Q8IY57 180 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 DEFB124Q8NES8 71 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms