RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NUP93Q8N1F7 819 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 FSTL5Q8N475 847 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 ANKS4BQ8N8V4 417 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PLA2G15Q8NCC3 412 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 TMEM116Q8NCL8 245 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ZFAND2BQ8WV99 257 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 TRMT61AQ96FX7 289 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 GCNAQ96QF7 691 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 HCFC1R1Q9NWW0 138 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 SLCO3A1Q9UIG8 710 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ADGBQ8N7X0 1667 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ATP7AQ04656 1500 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 GPRASP1Q5JY77 1395 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 STRCP1A6NGW2 1772 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 SPATA31A6Q5VVP1 1343 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ZNF335Q9H4Z2 1342 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 CLTCQ00610 1675 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 hCG_1809904A0A1W2PP81 198 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 A0A1W2PPE2 198 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 A0A1W2PR64 198 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 LIASO43766 372 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PLA2G1BP04054 148 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 ITPKBP27987 946 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 MC5RP33032 325 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 BMPR1AP36894 532 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 MCM2P49736 904 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PGDP52209 483 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 CHN2P52757 468 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 WNT3AP56704 352 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 VAMP2P63027 116 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 KRT83P78385 493 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 TMF1P82094 1093 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 CHAF1BQ13112 559 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ATP1A4Q13733 1029 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 NAA25Q14CX7 972 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 SEC23BQ15437 767 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ADIPOQQ15848 244 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 TRIM71Q2Q1W2 868 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 C19orf54Q5BKX5 351 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 OLFML2BQ68BL8 750 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 TRIM68Q6AZZ1 485 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 MOB3CQ70IA8 216 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 CHST9Q7L1S5 443 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ADGRE4PQ86SQ3 457 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 KBTBD6Q86V97 674 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ELOA2Q8IYF1 753 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 CEP57L1Q8IYX8 460 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 C2CD4CQ8TF44 421 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ARRDC3Q96B67 414 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 MYCBPQ99417 103 aaPredicted RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 C17orf80Q9BSJ5 609 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 APOL6Q9BWW8 343 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 RANBP17Q9H2T7 1088 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 MUC13Q9H3R2 512 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 PIM2Q9P1W9 311 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 TBC1D14Q9P2M4 693 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 ACAD8Q9UKU7 415 aa2.87□□□□□ -1.95
XRN1-210ENST00000472697 INTS6Q9UL03 887 aaKnown RBP2.87□□□□□ -1.95
XRN1-210ENST00000472697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.87□□□□□ -1.95
XRN1-210ENST00000472697 AHDC1Q5TGY3 1603 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 SH2D7A6NKC9 451 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 TACC1O75410 805 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NME6O75414 186 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 NNMTP40261 264 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CPA2P48052 419 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PLIN5Q00G26 463 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 IL1RL1Q01638 556 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SATB1Q01826 763 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 MEF2AQ02078 507 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 CYP27A1Q02318 531 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TOP3AQ13472 1001 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 ZNF628Q5EBL2 1059 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ZC3H14Q6PJT7 736 aaKnown RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 SLFN11Q7Z7L1 901 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 WDR48Q8TAF3 677 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SUN3Q8TAQ9 357 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SCFD2Q8WU76 684 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CASKIN2Q8WXE0 1202 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 MIEF2Q96C03 454 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TSPAN17Q96FV3 270 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 TMEM176AQ96HP8 235 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CCDC114Q96M63 670 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NLRP4Q96MN2 994 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 GAD1Q99259 594 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 DPYSL5Q9BPU6 564 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 ACAT2Q9BWD1 397 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 KRTAP4-5Q9BYR2 181 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 XPNPEP3Q9NQH7 507 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 SETD4Q9NVD3 440 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 P4HTMQ9NXG6 502 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CFAP97Q9P2B7 532 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PI4KBQ9UBF8 816 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 MTRRQ9UBK8 725 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 PEMTQ9UBM1 199 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 FETUBQ9UGM5 382 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CHORDC1Q9UHD1 332 aaPredicted RBP2.86□□□□□ -1.95
XRN1-210ENST00000472697 FBXO4Q9UKT5 387 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 CAPN11Q9UMQ6 739 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NUB1Q9Y5A7 615 aa2.86□□□□□ -1.95
XRN1-210ENST00000472697 NLRP1Q9C000 1473 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms