RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PCDHGA12O60330 932 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 SYNCRIPO60506 623 aaKnown RBP9.77□□□□□ -0.85
VCL-204ENST00000472585 HLA-DRAP01903 254 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 EPHX1P07099 455 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 CORO1AP31146 461 aaKnown RBP9.77□□□□□ -0.85
VCL-204ENST00000472585 ACTN2P35609 894 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 ZNF132P52740 706 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 RHDQ02161 417 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 INCA1Q0VD86 236 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 EFEMP1Q12805 493 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 TARDBPQ13148 414 aaKnown RBP eCLIP9.77□□□□□ -0.85
VCL-204ENST00000472585 PPP1R26Q5T8A7 1209 aaPredicted RBP9.77□□□□□ -0.85
VCL-204ENST00000472585 BROXQ5VW32 411 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 BHLHA9Q7RTU4 235 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 CCDC186Q7Z3E2 898 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 ADAT2Q7Z6V5 191 aaKnown RBP9.77□□□□□ -0.85
VCL-204ENST00000472585 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 DENND1CQ8IV53 801 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 SNIP1Q8TAD8 396 aaKnown RBP9.77□□□□□ -0.85
VCL-204ENST00000472585 TMEM174Q8WUU8 243 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 IGSF8Q969P0 613 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 TMEM176AQ96HP8 235 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 NRSN2Q9GZP1 204 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 TMEM245Q9H330 911 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 CUEDC2Q9H467 287 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 MTG2Q9H4K7 406 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 TM9SF3Q9HD45 589 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 ANKRD6Q9Y2G4 727 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.77□□□□□ -0.85
VCL-204ENST00000472585 PCDHGA1Q9Y5H4 931 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 UBE4BO95155 1302 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 PVALEFA0A1B0GWK0 134 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 B8ZZF3 427 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 CBX4O00257 560 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 TULP2O00295 520 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 ENC1O14682 589 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 WNT9AO14904 365 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 NPC1O15118 1278 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 DFNA5O60443 496 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 TSPAN3O60637 253 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PPP6R2O75170 966 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 RFPL3O75679 317 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 WISP1O95388 367 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 LDOC1O95751 146 aaPredicted RBP9.76□□□□□ -0.85
VCL-204ENST00000472585 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
VCL-204ENST00000472585 C1SP09871 688 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PDCP20941 246 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 HLA-FP30511 346 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 AFMP43652 599 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 SGSHP51688 502 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 AP3M2P53677 418 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 IL9RQ01113 521 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 TLE3Q04726 772 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PPP3CAQ08209 521 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 KCNH2Q12809 1159 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 MMRN1Q13201 1228 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 CAMK2GQ13555 558 aaPredicted RBP9.76□□□□□ -0.85
VCL-204ENST00000472585 RTP5Q14D33 572 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 STK38Q15208 465 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 E2F5Q15329 346 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 SHBQ15464 509 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PCSK4Q6UW60 755 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 ADIPOR2Q86V24 386 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 SLC9A9Q8IVB4 645 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 FAM217AQ8IXS0 508 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 IQUBQ8NA54 791 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 TAS1R2Q8TE23 839 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 CYB5D2Q8WUJ1 264 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 UCMAQ8WVF2 138 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 BIRC7Q96CA5 298 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 WBP1Q96G27 269 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 LGMNQ99538 433 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 DUSP16Q9BY84 665 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 LRRC27Q9C0I9 530 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PCED1AQ9H1Q7 454 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PRSS16Q9NQE7 514 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 CLIC5Q9NZA1 410 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
VCL-204ENST00000472585 RASAL2Q9UJF2 1139 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 PCDHA5Q9Y5H7 936 aa9.76□□□□□ -0.85
VCL-204ENST00000472585 COL5A1P20908 1838 aaPredicted RBP9.75□□□□□ -0.85
VCL-204ENST00000472585 C10orf142B7Z368 130 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 SLC28A2O43868 658 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 WNT1P04628 370 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 IGHV4-34P06331 123 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 HOXD9P28356 352 aaPredicted RBP9.75□□□□□ -0.85
VCL-204ENST00000472585 CHKAP35790 457 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 CTSKP43235 329 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 GRIA4P48058 902 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 RPS14P62263 151 aaKnown RBP9.75□□□□□ -0.85
VCL-204ENST00000472585 COG7P83436 770 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 AMPD3Q01432 767 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 RAB41Q5JT25 222 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 HES3Q5TGS1 186 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 ANKS1BQ7Z6G8 1248 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 KIAA0907Q7Z7F0 614 aaPredicted RBP9.75□□□□□ -0.85
VCL-204ENST00000472585 SPACA3Q8IXA5 215 aa9.75□□□□□ -0.85
VCL-204ENST00000472585 CPXM2Q8N436 756 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms