RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 FAM3BP58499 235 aaPredicted RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 YPEL5P62699 121 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 RBM6P78332 1123 aaKnown RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 SF3A3Q12874 501 aaKnown RBP eCLIP4.42□□□□□ -1.7
MDM2-216ENST00000471946 CBFBQ13951 182 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 DAZAP2Q15038 168 aaPredicted RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 CCDC142Q17RM4 750 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 GRAMD1BQ3KR37 738 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 EARS2Q5JPH6 523 aaKnown RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 COLEC12Q5KU26 742 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 MEX3CQ5U5Q3 659 aaKnown RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 SLC18B1Q6NT16 456 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 YTHDF3Q7Z739 585 aaKnown RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 SRRM1Q8IYB3 904 aaKnown RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 CCT6BQ92526 530 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 ZNF845Q96IR2 970 aaPredicted RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 GPR78Q96P69 363 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 TRAPPC9Q96Q05 1148 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 ELAC1Q9H777 363 aaKnown RBP4.42□□□□□ -1.7
MDM2-216ENST00000471946 MAFFQ9ULX9 164 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 PCDHA10Q9Y5I2 948 aa4.42□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3DA0A087WVF3 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3IA0A087WXS9 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3EA0A087X179 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3KA0A087X1G2 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3BA6NDS4 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3FA6NER0 549 aaPredicted RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 EFCAB8A8MWE9 144 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3LB9A6J9 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 DSCR3O14972 297 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 PIP5K1CO60331 668 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 CYP3A4P08684 503 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3HP0C7X1 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 PRR35P0CG20 571 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 FBLP22087 321 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 NDUFS1P28331 727 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 EPHB2P29323 1055 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TACR3P29371 465 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 SLC8A1P32418 973 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 HALP42357 657 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 ABCG1P45844 678 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 MRPS21P82921 87 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 POSTNQ15063 836 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 RPS6KA2Q15349 733 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 SRSF7Q16629 238 aaKnown RBP eCLIP4.41□□□□□ -1.71e-6■□□□□ 9
MDM2-216ENST00000471946 SUPT20HL1Q3ZLR7 823 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 KIAA1614Q5VZ46 1190 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3GQ6DHY5 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TANGO2Q6ICL3 276 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3CQ6IPX1 549 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 NFRKBQ6P4R8 1299 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D3Q8IZP1 549 aaPredicted RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 SRFBP1Q8NEF9 429 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 CSGALNACT1Q8TDX6 532 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 C3orf49Q96BT1 292 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 TBC1D20Q96BZ9 403 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 P2RY11Q96G91 374 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 LTV1Q96GA3 475 aaPredicted RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 SENP7Q9BQF6 1050 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 DDX23Q9BUQ8 820 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 TAF1DQ9H5J8 278 aaPredicted RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 SEPSECSQ9HD40 501 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 LIN7CQ9NUP9 197 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 SRP68Q9UHB9 627 aaKnown RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 NFU1Q9UMS0 254 aa4.41□□□□□ -1.7
MDM2-216ENST00000471946 SIRT4Q9Y6E7 314 aaPredicted RBP4.41□□□□□ -1.7
MDM2-216ENST00000471946 CYP2D7A0A087X1C5 515 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 HMX3A6NHT5 357 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 AGAP5A6NIR3 686 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 SLC38A8A6NNN8 435 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 TPD52L2O43399 206 aaKnown RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 RFPL3SP0C7P2 107 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 VEGFAP15692 232 aaPredicted RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 KELP23276 732 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 ATP5F1P24539 256 aaPredicted RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 GRK5P34947 590 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 ARHGAP25P42331 645 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 GRK6P43250 576 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 SLC37A1P57057 533 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 SHC2P98077 582 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 RNASELQ05823 741 aaKnown RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 ZNF268Q14587 947 aaPredicted RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 ANO1Q5XXA6 986 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 SLC2A7Q6PXP3 512 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 SLC39A5Q6ZMH5 540 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 RFX6Q8HWS3 928 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 CNGA4Q8IV77 575 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 GALNT15Q8N3T1 639 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 NKAPQ8N5F7 415 aaKnown RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.4□□□□□ -1.71
MDM2-216ENST00000471946 CLEC4CQ8WTT0 213 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 TRAPPC12Q8WVT3 735 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 ASB12Q8WXK4 309 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 RUBCNQ92622 972 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 PIGKQ92643 395 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 FCRL5Q96RD9 977 aa4.4□□□□□ -1.71
MDM2-216ENST00000471946 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms