RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LNP1A1A4G5 178 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 WASH3PC4AMC7 463 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 MSI1O43347 362 aaKnown RBP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 ADRB1P08588 477 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 ERCC5P28715 1186 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 GNA15P30679 374 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 IL12RB1P42701 662 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 ZNF165P49910 485 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 ZNF75DP51815 510 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 TBX4P57082 545 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 RPL6Q02878 288 aaKnown RBP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 ARID5AQ03989 594 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 DAB2IPQ5VWQ8 1189 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 TCEAL6Q6IPX3 200 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 SCUBE3Q8IX30 993 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 FRMD1Q8N878 549 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 PIGKQ92643 395 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 TCEAL3Q969E4 200 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 CRACR2AQ9BSW2 395 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 LSM14BQ9BX40 385 aaKnown RBP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 NUSAP1Q9BXS6 441 aaKnown RBP14.04□□□□□ -0.16
HMGN1-211ENST00000471260 MIS12Q9H081 205 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 ST7Q9NRC1 585 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 PILRBQ9UKJ0 227 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 CLEC4EQ9ULY5 219 aa14.04□□□□□ -0.16
HMGN1-211ENST00000471260 TYW5A2RUC4 315 aaKnown RBP14.03□□□□□ -0.16
HMGN1-211ENST00000471260 GOLGA6L19H0YKK7 550 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 PIK3R2O00459 728 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 CAPN9O14815 690 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 THAP12O43422 761 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 ACSL4O60488 711 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 SYNCRIPO60506 623 aaKnown RBP14.03□□□□□ -0.16
HMGN1-211ENST00000471260 FYNP06241 537 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 SLC9A1P19634 815 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 HLA-FP30511 346 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 PTGER3P43115 390 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 MTIF2P46199 727 aaKnown RBP14.03□□□□□ -0.16
HMGN1-211ENST00000471260 ZNF33AQ06730 810 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 ZNF234Q14588 700 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 FUT11Q495W5 492 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 PIK3R6Q5UE93 754 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 SLC23A3Q6PIS1 610 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 SHC3Q92529 594 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 FOXJ1Q92949 421 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 FAM149B1Q96BN6 582 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 CIPCQ9C0C6 399 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 PRDM16Q9HAZ2 1276 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 POPDC2Q9HBU9 364 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 PLA2G4CQ9UP65 541 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 RAD54BQ9Y620 910 aa14.03□□□□□ -0.16
HMGN1-211ENST00000471260 GON4LQ3T8J9 2241 aa14.02□□□□□ -0.16
HMGN1-211ENST00000471260 BECN2A8MW95 431 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 TSPAN3O60637 253 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 NDUFS2O75306 463 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 CALCAP01258 141 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 ATP5BP06576 529 aaKnown RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 GLI1P08151 1106 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 C7P10643 843 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 PON1P27169 355 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 SNX16P57768 344 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 YWHAZP63104 245 aaKnown RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 IRX4P78413 519 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 PTK2Q05397 1052 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 DUOXA1Q1HG43 343 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 FAM133BQ5BKY9 247 aaKnown RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 TRIM61Q5EBN2 209 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 TMEM215Q68D42 235 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 DENND1BQ6P3S1 775 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 SERPINA13PQ6UXR4 307 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 TMPRSS6Q8IU80 811 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 AHI1Q8N157 1196 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 DQX1Q8TE96 717 aaKnown RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 SLC39A13Q96H72 371 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 ZNF419Q96HQ0 510 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 FCRL2Q96LA5 508 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 LHX5Q9H2C1 402 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 FBRSQ9HAH7 460 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 ITM2CQ9NQX7 267 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 USP36Q9P275 1121 aaKnown RBP14.02□□□□□ -0.17
HMGN1-211ENST00000471260 PCDHGC3Q9UN70 934 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 CYP8B1Q9UNU6 501 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 NAALADL1Q9UQQ1 740 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 NFE2L3Q9Y4A8 694 aa14.02□□□□□ -0.17
HMGN1-211ENST00000471260 CNOT1A5YKK6 2376 aaKnown RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 SPTBN2O15020 2390 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 C4orf47A7E2U8 309 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 E5RJQ4 531 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 CDX4O14627 284 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 PAPSS1O43252 624 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 PABPC1P11940 636 aaKnown RBP14.01□□□□□ -0.17
HMGN1-211ENST00000471260 ITPKAP23677 461 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 CD6P30203 668 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 OXTRP30559 389 aa14.01□□□□□ -0.17
HMGN1-211ENST00000471260 USP8P40818 1118 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms