RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MORC2Q9Y6X9 1032 aaPredicted RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 COL27A1Q8IZC6 1860 aaPredicted RBP6.19□□□□□ -1.42
VARS-222ENST00000470953 TCHHQ07283 1943 aa6.19□□□□□ -1.42
VARS-222ENST00000470953 CROCCQ5TZA2 2017 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 GOLGA6L4A6NEF3 574 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 PIRO00625 290 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 TRIM38O00635 465 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 CYB561D2O14569 222 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SLC9A3R1O14745 358 aaPredicted RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 POLR2DO15514 142 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 TSPAN3O60637 253 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 OLFM2O95897 454 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 OAS1P00973 400 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 CISD3P0C7P0 127 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 CD99P14209 185 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 CYP3A5P20815 502 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 ACAT1P24752 427 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 E2F1Q01094 437 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SMARCB1Q12824 385 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 KLRB1Q12918 225 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 MRPL49Q13405 166 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 PKP1Q13835 747 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 POSTNQ15063 836 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 L1TD1Q5T7N2 865 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 SFMBT2Q5VUG0 894 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SP5Q6BEB4 398 aaPredicted RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 GRAMD4Q6IC98 578 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SDE2Q6IQ49 451 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 HS2ST1Q7LGA3 356 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 XYLT1Q86Y38 959 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SCN4BQ8IWT1 228 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 BBS7Q8IWZ6 715 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 CD302Q8IX05 232 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 ADGRF2Q8IZF7 708 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 CPT1CQ8TCG5 803 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SIPA1Q96FS4 1042 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 ZNF560Q96MR9 790 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 NUP58Q9BVL2 599 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 EBF2Q9HAK2 575 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 PLEKHA5Q9HAU0 1116 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 OLFML3Q9NRN5 406 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 EXOC1Q9NV70 894 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 DNAJC17Q9NVM6 304 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 TJP2Q9UDY2 1190 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 GTF3C4Q9UKN8 822 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 AGO2Q9UKV8 859 aaKnown RBP6.18□□□□□ -1.42
VARS-222ENST00000470953 SHANK1Q9Y566 2161 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 CKAP5Q14008 2032 aa6.18□□□□□ -1.42
VARS-222ENST00000470953 PLXNA2O75051 1894 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 A0A0B4J269 797 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ZNF840PA6NDX5 716 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 GFRA2O00451 464 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 VILLO15195 856 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 CASC3O15234 703 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 OPA1O60313 960 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 DFNA5O60443 496 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 FSBPO95073 299 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 TNFSF15O95150 251 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 IL18RAPO95256 599 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 SIX3O95343 332 aaPredicted RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 ABL1P00519 1130 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 PIGRP01833 764 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 IGHV4-34P06331 123 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 TMEM191BP0C7N4 346 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 NR1D1P20393 614 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 EPHA8P29322 1005 aaPredicted RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 OXTRP30559 389 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 DEKP35659 375 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 ACOT2P49753 483 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 C21orf59P57076 290 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 TFAMQ00059 246 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 GTF2BQ00403 316 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ENOX2Q16206 610 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 FAM26FQ5R3K3 315 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 SPATA1Q5VX52 437 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 BTBD8Q5XKL5 378 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 JADE1Q6IE81 842 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ZNF720Q7Z2F6 126 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ADAT2Q7Z6V5 191 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 METTL23Q86XA0 190 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 DCP1BQ8IZD4 617 aaKnown RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 THEM5Q8N1Q8 247 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 EFCAB3Q8N7B9 438 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 KIAA1958Q8N8K9 716 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 FSIP1Q8NA03 581 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 PRR7Q8TB68 274 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 PRCCQ92733 491 aaPredicted RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 SAAL1Q96ER3 474 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ATXN7L3BQ96GX2 97 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 TSPAN18Q96SJ8 248 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 FAM213AQ9BRX8 229 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 SCAND2PQ9GZW5 306 aaPredicted RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 OSBPL2Q9H1P3 480 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 ST6GALNAC4Q9H4F1 302 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 SPHK2Q9NRA0 654 aa6.17□□□□□ -1.42
VARS-222ENST00000470953 RBAKQ9NYW8 714 aaPredicted RBP6.17□□□□□ -1.42
VARS-222ENST00000470953 PCDHA7Q9UN72 937 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms