RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 LPAR3Q9UBY5 353 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 SLC27A6Q9Y2P4 619 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 BRWD3Q6RI45 1802 aa4.8□□□□□ -1.64
COL9A1-206ENST00000470652 COL5A2P05997 1499 aaPredicted RBP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 CDK12Q9NYV4 1490 aaPredicted RBP4.8□□□□□ -1.64
COL9A1-206ENST00000470652 EP400Q96L91 3159 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 NSD2O96028 1365 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 COL15A1P39059 1388 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 NPC1L1Q9UHC9 1359 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 GLI3P10071 1580 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 MEGF6O75095 1541 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 PPP6CO00743 305 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 ADAMTS3O15072 1205 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 COQ9O75208 318 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 KRT18P05783 430 aaKnown RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 MYL4P12829 197 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 ATICP31939 592 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 AMPHP49418 695 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 COPB1P53618 953 aaKnown RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 COPAP53621 1224 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 EIF4A1P60842 406 aaKnown RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 EZH2Q15910 746 aaKnown RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 EPHA10Q5JZY3 1008 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 KLHDC7AQ5VTJ3 777 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 USP17L6PQ6QN14 398 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 KSR2Q6VAB6 950 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 ZNF66Q6ZN08 573 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 BHLHA9Q7RTU4 235 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 METTL25Q8N6Q8 603 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 MBD3L2Q8NHZ7 208 aaPredicted RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 LRRC46Q96FV0 321 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 TBCBQ99426 244 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 MAGEB5Q9BZ81 275 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 ASIC5Q9NY37 505 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 TMOD4Q9NZQ9 345 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 RRP7AQ9Y3A4 280 aaKnown RBP4.79□□□□□ -1.64
COL9A1-206ENST00000470652 BCL9LQ86UU0 1499 aa4.79□□□□□ -1.64
COL9A1-206ENST00000470652 AFF2P51816 1311 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 SLIT2O94813 1529 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 NWD2Q9ULI1 1742 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 TOGARAM1Q9Y4F4 1720 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 A0A1W2PPC4 97 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 INO80B-WBP1J3KQ70 363 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 APOL1O14791 398 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 KCNQ3O43525 872 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 PRC1O43663 620 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 NBPF7P0C2Y1 421 aaPredicted RBP4.78□□□□□ -1.64
COL9A1-206ENST00000470652 PRR35P0CG20 571 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 APEHP13798 732 aaKnown RBP4.78□□□□□ -1.64
COL9A1-206ENST00000470652 KELP23276 732 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 ADRA1DP25100 572 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 EPHB2P29323 1055 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 CFHR3Q02985 330 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 RALBP1Q15311 655 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 CEP78Q5JTW2 689 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 TMEM65Q6PI78 240 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 NEK8Q86SG6 692 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 GALNT16Q8N428 558 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 FSTL5Q8N475 847 aaPredicted RBP4.78□□□□□ -1.64
COL9A1-206ENST00000470652 LINC01465Q8N7H1 131 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 C12orf76Q8N812 135 aaPredicted RBP4.78□□□□□ -1.64
COL9A1-206ENST00000470652 PNPLA1Q8N8W4 532 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 ABHD5Q8WTS1 349 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 IP6K1Q92551 441 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 C5orf34Q96MH7 638 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 HS6ST2Q96MM7 605 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 NRIP3Q9NQ35 241 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 LRRC37A3O60309 1634 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 CPDO75976 1380 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 FLT4P35916 1363 aa4.78□□□□□ -1.64
COL9A1-206ENST00000470652 KAT6BQ8WYB5 2073 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 A0A087WZ62 844 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 TMEM232C9JQI7 657 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 H3BNC9 293 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 CCNT2O60583 730 aaKnown RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 MYL1P05976 194 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 TMEM225BP0DP42 221 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 CYP2A6P11509 494 aaPredicted RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 IDEP14735 1019 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 MPGP29372 298 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 MCM5P33992 734 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 KRTAP10-9P60411 292 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 FAXCQ5TGI0 409 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 CCDC181Q5TID7 509 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 MEX3CQ5U5Q3 659 aaKnown RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 SULT6B1Q6IMI4 303 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 SLC18B1Q6NT16 456 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 MRNIPQ6NTE8 343 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 ZNF813Q6ZN06 617 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 DCDC5Q6ZRR9 648 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 KRT73Q86Y46 540 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 SUN3Q8TAQ9 357 aa4.77□□□□□ -1.65
COL9A1-206ENST00000470652 PNISRQ8TF01 805 aaKnown RBP4.77□□□□□ -1.65
COL9A1-206ENST00000470652 BRI3BPQ8WY22 251 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms