RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 RNF25Q96BH1 459 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 DHX58Q96C10 678 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 TMEM176AQ96HP8 235 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 ELF4Q99607 663 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 BLZF1Q9H2G9 400 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 MARCH2Q9P0N8 246 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
CCDC171-204ENST00000470191 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 TDRD6O60522 2096 aaKnown RBP9.54□□□□□ -0.88
CCDC171-204ENST00000470191 DOCK9Q9BZ29 2069 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 WNT9AO14904 365 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 VILLO15195 856 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 TIMM44O43615 452 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 STX6O43752 255 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 DFNA5O60443 496 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 TRIM21P19474 475 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 HOXD9P28356 352 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 CD38P28907 300 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 HLA-FP30511 346 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 ACTN2P35609 894 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 PSEN1P49768 467 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 GALCP54803 685 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 RACK1P63244 317 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 TLE3Q04726 772 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 EHHADHQ08426 723 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 RTP5Q14D33 572 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 MPPE1Q53F39 396 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 PPP1R26Q5T8A7 1209 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 ZNF776Q68DI1 518 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 FBXL19Q6PCT2 694 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 NCEH1Q6PIU2 408 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 CCDC186Q7Z3E2 898 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 ZC3H3Q8IXZ2 948 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 FAM181AQ8N9Y4 354 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 LSM14AQ8ND56 463 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 SNIP1Q8TAD8 396 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 NDRG1Q92597 394 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 HNRNPABQ99729 332 aaKnown RBP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 ORAI3Q9BRQ5 295 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC171-204ENST00000470191 SLC2A11Q9BYW1 496 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 NRSN2Q9GZP1 204 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 TNMDQ9H2S6 317 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 EBF2Q9HAK2 575 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 SGK2Q9HBY8 427 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 FBXL12Q9NXK8 326 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 SERGEFQ9UGK8 458 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 GGA2Q9UJY4 613 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 STRIP2Q9ULQ0 834 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 PCDHGA1Q9Y5H4 931 aa9.53□□□□□ -0.88
CCDC171-204ENST00000470191 A0A1W2PP55 124 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 A0A1W2PPC4 97 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 MID1O15344 667 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 PAPSS1O43252 624 aaPredicted RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 SDC3O75056 442 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 RNASEH2AO75792 299 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 C1SP09871 688 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 PABPC1P11940 636 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 ASPAP45381 313 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 NUMBP49757 651 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 SGSHP51688 502 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 YWHAGP61981 247 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 BROXQ5VW32 411 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 UNC93AQ86WB7 457 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 DHX40Q8IX18 779 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 CPXM2Q8N436 756 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 SAP25Q8TEE9 199 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 SKA1Q96BD8 255 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 TMA16Q96EY4 203 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 USP28Q96RU2 1077 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 CDK5RAP1Q96SZ6 601 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 OMDQ99983 421 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 SEMA4CQ9C0C4 833 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 LRRC27Q9C0I9 530 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 NEUROG2Q9H2A3 272 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 GDF3Q9NR23 364 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 STIM2Q9P246 746 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 TFIP11Q9UBB9 837 aaKnown RBP9.52□□□□□ -0.89
CCDC171-204ENST00000470191 SFMBT1Q9UHJ3 866 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 CLCA2Q9UQC9 943 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 UBE4BO95155 1302 aa9.52□□□□□ -0.89
CCDC171-204ENST00000470191 ARHGAP6O43182 974 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 TBL1XO60907 577 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 SIN3BO75182 1162 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 EPHA8P29322 1005 aaPredicted RBP9.51□□□□□ -0.89
CCDC171-204ENST00000470191 CD70P32970 193 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms