RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 COX16Q9P0S2 106 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 SLC12A6Q9UHW9 1150 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 HCN2Q9UL51 889 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 CLEC4EQ9ULY5 219 aa10.1□□□□□ -0.79
SRRT-208ENST00000469602 DMXL1Q9Y485 3027 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 CCDC163A0A0D9SF12 145 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 PRR23AA6NEV1 266 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 PRRT4C9JH25 899 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 GOLGA8SH3BPF8 625 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 M0QYT0 321 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 SGK1O00141 431 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 TBL1XO60907 577 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 ADAM23O75077 832 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 APBB3O95704 486 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 LMNAP02545 664 aaKnown RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 ABCB4P21439 1286 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 HOXD11P31277 338 aaPredicted RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 CCR1P32246 355 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 PBX1P40424 430 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 SGSHP51688 502 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 DGKEP52429 567 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 NME3Q13232 169 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 MTA1Q13330 715 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 CRY1Q16526 586 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 GEN1Q17RS7 908 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 SLC25A52Q3SY17 297 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 FIGNQ5HY92 759 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 EOGTQ5NDL2 527 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 SFMBT2Q5VUG0 894 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 OTUD1Q5VV17 481 aaPredicted RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 EGFLAMQ63HQ2 1017 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 RNF43Q68DV7 783 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 LRSAM1Q6UWE0 723 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 ARCQ7LC44 396 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 ASCL5Q7RTU5 278 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 ANKS1BQ7Z6G8 1248 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 ALYREFQ86V81 257 aaKnown RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 WDR5BQ86VZ2 330 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 ATP6V0D2Q8N8Y2 350 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 HJURPQ8NCD3 748 aaPredicted RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 RNF34Q969K3 372 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 NT5C3BQ969T7 300 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 PRICKLE1Q96MT3 831 aaPredicted RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 C11orf70Q9BRQ4 267 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 NUP58Q9BVL2 599 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 NUCKS1Q9H1E3 243 aaKnown RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 EPC1Q9H2F5 836 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 ZDHHC4Q9NPG8 344 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 PIGVQ9NUD9 493 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 AIPL1Q9NZN9 384 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
SRRT-208ENST00000469602 TMEM59LQ9UK28 342 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 STAP1Q9ULZ2 295 aa10.09□□□□□ -0.79
SRRT-208ENST00000469602 CKAP5Q14008 2032 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 TYW5A2RUC4 315 aaKnown RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 GFRA3O60609 400 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 F9P00740 461 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 HNRNPLP14866 589 aaKnown RBP eCLIP10.08□□□□□ -0.8
SRRT-208ENST00000469602 TFE3P19532 575 aaPredicted RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 TACR2P21452 398 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 HLA-FP30511 346 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 NTSR1P30989 418 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 CNR2P34972 360 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 FLT3P36888 993 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 PXNP49023 591 aaPredicted RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 CXCR3P49682 368 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 SULT1E1P49888 294 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 GSCP56915 257 aaPredicted RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 RPS24P62847 133 aaKnown RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 C1QBPQ07021 282 aaKnown RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 PTP4A2Q12974 167 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 EIF4HQ15056 248 aaKnown RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 ASIC2Q16515 512 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 MS4A13Q5J8X5 152 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 E4F1Q66K89 784 aaPredicted RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 TRNP1Q6NT89 227 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 TMEM92Q6UXU6 159 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.8
SRRT-208ENST00000469602 CHSY1Q86X52 802 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 CHPFQ8IZ52 775 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 ZNF557Q8N988 423 aaPredicted RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 SUMF1Q8NBK3 374 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 TSTD1Q8NFU3 115 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 OLIG1Q8TAK6 271 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 MYEOVQ96EZ4 313 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 PGAP3Q96FM1 320 aaPredicted RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 SYT11Q9BT88 431 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 METTL5Q9NRN9 209 aaKnown RBP10.08□□□□□ -0.8
SRRT-208ENST00000469602 TMEM51Q9NW97 253 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 ADAM22Q9P0K1 906 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 IFNKQ9P0W0 207 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 EBF1Q9UH73 591 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 DOCK4Q8N1I0 1966 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 LAMA1P25391 3075 aa10.08□□□□□ -0.8
SRRT-208ENST00000469602 PLXND1Q9Y4D7 1925 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms