RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ARHGAP18Q8N392 663 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZNF843Q8N446 348 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 LSM14AQ8ND56 463 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 WFIKKN2Q8TEU8 576 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 FCRL3Q96P31 734 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 ELF4Q99607 663 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 CYP3A43Q9HB55 503 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 APOBEC3GQ9HC16 384 aaKnown RBP13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
TRAPPC12-216ENST00000469400 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 IKBKBO14920 756 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 SPTLC2O15270 562 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 C1SP09871 688 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 CDK4P11802 303 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 CD58P19256 250 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■□□ 16
TRAPPC12-216ENST00000469400 PDE4CQ08493 712 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 CUL4BQ13620 913 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 RTP5Q14D33 572 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 SHBQ15464 509 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 TTC31Q49AM3 519 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 C1orf220Q5T0J3 134 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 SHC4Q6S5L8 630 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 ZC3H3Q8IXZ2 948 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 SAP25Q8TEE9 199 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 GOLGA1Q92805 767 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 SLC6A18Q96N87 628 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 NRSN2Q9GZP1 204 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 MAGEF1Q9HAY2 307 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 ABCB8Q9NUT2 735 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 GGA2Q9UJY4 613 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 MAST4O15021 2626 aa13.39□□□□□ -0.27
TRAPPC12-216ENST00000469400 A0A1W2PPC4 97 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 FAM47DPA6NHR8 397 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 POLR2DO15514 142 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 PPP6R2O75170 966 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 WNT1P04628 370 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 ITGAVP06756 1048 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 DLDP09622 509 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 PABPC1P11940 636 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 ABCB4P21439 1286 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 HARS2P49590 506 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 ACADVLP49748 655 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 ZNF394Q53GI3 561 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 MBLAC2Q68D91 279 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 ZNF776Q68DI1 518 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 BAP1Q92560 729 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 TMA16Q96EY4 203 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 HEXIM2Q96MH2 286 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 MTG2Q9H4K7 406 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 EBF2Q9HAK2 575 aa13.38□□□□□ -0.27
TRAPPC12-216ENST00000469400 CAPN9O14815 690 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 NR3C1P04150 777 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 ATP5BP06576 529 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 AFMP43652 599 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 GALCP54803 685 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 STK4Q13043 487 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 RAB41Q5JT25 222 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 CEP135Q66GS9 1140 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 NCEH1Q6PIU2 408 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 USP30Q70CQ3 517 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 GPR155Q7Z3F1 870 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 EID2Q8N6I1 236 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 TAS1R2Q8TE23 839 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 GANCQ8TET4 914 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 TSC1Q92574 1164 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 NDRG1Q92597 394 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 FGF11Q92914 225 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 SKA1Q96BD8 255 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 DNAI2Q9GZS0 605 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 NIF3L1Q9GZT8 377 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 RSPH9Q9H1X1 276 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 KCTD10Q9H3F6 313 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 FBXL12Q9NXK8 326 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 STOML2Q9UJZ1 356 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 NCKAP1Q9Y2A7 1128 aa13.37□□□□□ -0.27
TRAPPC12-216ENST00000469400 COL5A1P20908 1838 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
TRAPPC12-216ENST00000469400 CUTAO60888 179 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms