RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZNF846Q147U1 533 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 LRRC14Q15048 493 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 TRADDQ15628 312 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 FXNQ16595 210 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 TMEM266Q2M3C6 531 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ABCB5Q2M3G0 1257 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 KCTD21Q4G0X4 260 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 CAVIN4Q5BKX8 364 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 PPP6R3Q5H9R7 873 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF362Q5T0B9 420 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 RBM20Q5T481 1227 aaKnown RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 C10orf62Q5T681 223 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 TEDDM1Q5T9Z0 273 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 BTBD8Q5XKL5 378 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ANKRD40Q6AI12 368 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 CTRB2Q6GPI1 263 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ERAP2Q6P179 960 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 MPRIPQ6WCQ1 1025 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 PRR23BQ6ZRT6 265 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 TRABD2AQ86V40 505 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ANKLE2Q86XL3 938 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 KBTBD2Q8IY47 623 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 VGLL2Q8N8G2 317 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 GABPB2Q8TAK5 448 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 DTX3LQ8TDB6 740 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 SLC2A14Q8TDB8 520 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 MAML1Q92585 1016 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 NRBF2Q96F24 287 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 CALML4Q96GE6 196 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 SUCLG2Q96I99 432 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 SNX18Q96RF0 628 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 DOK1Q99704 481 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 EFHD1Q9BUP0 239 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 OSBPL11Q9BXB4 747 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 RAB34Q9BZG1 259 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 PAIP1Q9H074 479 aaKnown RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF700Q9H0M5 742 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 CDC42EP4Q9H3Q1 356 aaKnown RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 SEMA6CQ9H3T2 930 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ANKHQ9HCJ1 492 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 HMG20AQ9NP66 347 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 OLFML3Q9NRN5 406 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 PNPLA3Q9NST1 481 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 NPAP1Q9NZP6 1156 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 TMOD2Q9NZR1 351 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 HEY2Q9UBP5 337 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 STK39Q9UEW8 545 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 DBR1Q9UK59 544 aaKnown RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ITGA11Q9UKX5 1188 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 PACSIN2Q9UNF0 486 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 TFR2Q9UP52 801 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 PA2G4Q9UQ80 394 aaKnown RBP5.01□□□□□ -1.61
SF3B1-207ENST00000468925 NAALADL1Q9UQQ1 740 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 MYRFQ9Y2G1 1151 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 GDAQ9Y2T3 454 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 SNX24Q9Y343 169 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 NEU2Q9Y3R4 380 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 NOX1Q9Y5S8 564 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 KDM3BQ7LBC6 1761 aa5.01□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF335Q9H4Z2 1342 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 ADAMTS13Q76LX8 1427 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MYH4Q9Y623 1939 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 A0A087X0B3 334 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ARHGEF35A5YM69 484 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 I3L4J1 428 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TXNDC9O14530 226 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 EIF1AYO14602 144 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 SLC22A2O15244 555 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SNX2O60749 519 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 DDAH1O94760 285 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 STAMBPO95630 424 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CYP11A1P05108 521 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SERPINA6P08185 405 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 SPATA31D3P0C874 917 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 THRAP10827 490 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 MCF2P10911 925 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 KRT13P13646 458 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC130P13994 396 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 PSMC3P17980 439 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 POLR2CP19387 275 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 AOC1P19801 751 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 FUT4P22083 530 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 PMLP29590 882 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 NMT1P30419 496 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 FOXN2P32314 431 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 COILP38432 576 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 GRIA2P42262 883 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 ECE1P42892 770 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 RPL21P46778 160 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 ALDH1A3P47895 512 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 RFX5P48382 616 aaPredicted RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 PRIM2P49643 509 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CASP5P51878 434 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TMBIM6P55061 237 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 OLR1P78380 273 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TXNL4AP83876 142 aaKnown RBP5□□□□□ -1.61
SF3B1-207ENST00000468925 BTKQ06187 659 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 TFCP2Q12800 502 aa5□□□□□ -1.61
SF3B1-207ENST00000468925 CDC20Q12834 499 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms