RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 FNDC3BQ53EP0 1204 aaKnown RBP12.28□□□□□ -0.44
VPS26A-204ENST00000467852 ZNF776Q68DI1 518 aaPredicted RBP12.28□□□□□ -0.44
VPS26A-204ENST00000467852 CAPRIN2Q6IMN6 1127 aaKnown RBP12.28□□□□□ -0.44
VPS26A-204ENST00000467852 CPLX2Q6PUV4 134 aaKnown RBP12.28□□□□□ -0.44
VPS26A-204ENST00000467852 TOP6BLQ8N6T0 577 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 SORCS1Q8WY21 1168 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 FBXL12Q9NXK8 326 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 CDH9Q9ULB4 789 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 PLA2G4CQ9UP65 541 aa12.28□□□□□ -0.44
VPS26A-204ENST00000467852 H0YCG3 227 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 PLD2O14939 933 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
VPS26A-204ENST00000467852 GPR37O15354 613 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 MAP3K7O43318 606 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 GREM1O60565 184 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 RNF224P0DH78 156 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 CCT6AP40227 531 aaKnown RBP12.27□□□□□ -0.45
VPS26A-204ENST00000467852 MLLT10P55197 1068 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 PSMC1P62191 440 aaKnown RBP12.27□□□□□ -0.45
VPS26A-204ENST00000467852 KCNJ12Q14500 433 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 SNX30Q5VWJ9 437 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 IQCHQ86VS3 1027 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 NUP93Q8N1F7 819 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 UCKL1Q9NWZ5 548 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 AGAP1Q9UPQ3 857 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 KIAA1024Q9UPX6 916 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 SNX9Q9Y5X1 595 aa12.27□□□□□ -0.45
VPS26A-204ENST00000467852 APCP25054 2843 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 NEMP2A6NFY4 417 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 CLDN1O95832 211 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 IGHDP01880 384 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 PRKCGP05129 697 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 PLS3P13797 630 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 KLRB1Q12918 225 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 MAPK7Q13164 816 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 NAPEPLDQ6IQ20 393 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 HS2ST1Q7LGA3 356 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 NT5DC4Q86YG4 428 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 FAM114A1Q8IWE2 563 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 FBXL16Q8N461 479 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 FBXO39Q8N4B4 442 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 ZNF366Q8N895 744 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 GALNT11Q8NCW6 608 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 PIWIL1Q96J94 861 aaKnown RBP12.26□□□□□ -0.45
VPS26A-204ENST00000467852 DUSP23Q9BVJ7 150 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 TIPINQ9BVW5 301 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
VPS26A-204ENST00000467852 PABPC3Q9H361 631 aaKnown RBP12.26□□□□□ -0.45
VPS26A-204ENST00000467852 CRTAC1Q9NQ79 661 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 PRSS16Q9NQE7 514 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 NLGN3Q9NZ94 848 aa12.26□□□□□ -0.45
VPS26A-204ENST00000467852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 A0A0B4J269 797 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 CPED1A4D0V7 1026 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 PENKP01210 267 aaPredicted RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 WT1P19544 449 aaPredicted RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 LMO2P25791 158 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 POLR2BP30876 1174 aaKnown RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 ACOT2P49753 483 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 EIF3IQ13347 325 aaKnown RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 ZNF177Q13360 481 aaPredicted RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 STAT4Q14765 748 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 ECM1Q16610 540 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 RINT1Q6NUQ1 792 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 RSRC2Q7L4I2 434 aaKnown RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 PRPF39Q86UA1 669 aaKnown RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 SLC34A3Q8N130 599 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 RBBP8NLQ8NC74 664 aaPredicted RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 WDR48Q8TAF3 677 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 PCED1BQ96HM7 432 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 HEXIM2Q96MH2 286 aaKnown RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 EPAS1Q99814 870 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 OMDQ99983 421 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 TMEM60Q9H2L4 133 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 TMEM245Q9H330 911 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 BRMS1Q9HCU9 246 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 DDX19AQ9NUU7 478 aaKnown RBP12.25□□□□□ -0.45
VPS26A-204ENST00000467852 GDAP2Q9NXN4 497 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 DNM3Q9UQ16 869 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 HIVEP3Q5T1R4 2406 aa12.25□□□□□ -0.45
VPS26A-204ENST00000467852 LY6G6EA0A0G2JKS1 128 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
VPS26A-204ENST00000467852 TLR5O60602 858 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 RNASEH1O60930 286 aaKnown RBP12.24□□□□□ -0.45
VPS26A-204ENST00000467852 ITGB3P05106 788 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 UGT1A5P35504 534 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 CHKAP35790 457 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 KRT2P35908 639 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 NR5A1Q13285 461 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 FYB2Q5VWT5 728 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 BLOC1S2Q6QNY1 142 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 EFL1Q7Z2Z2 1120 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms