RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 DEPDC1BQ8WUY9 529 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 CHMP6Q96FZ7 201 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 SCLYQ96I15 445 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PAFAH2Q99487 392 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 ZCWPW1Q9H0M4 648 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 ACSS3Q9H6R3 686 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PCDHB7Q9Y5E2 793 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 MYO16Q9Y6X6 1858 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 A0A0A0MRY4 1105 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 HACD1B0YJ81 288 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 NT5C1B-RDH14C9J2C7 533 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 TNFRSF10BO14763 440 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 DRD4P21917 467 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 ARL13BQ3SXY8 428 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PLEKHG4Q58EX7 1191 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 MPP5Q8N3R9 675 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 TTC9BQ8N6N2 239 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 GPR152Q8TDT2 470 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 DYDC1Q8WWB3 177 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 SPATA13Q96N96 652 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 TRABDQ9H4I3 376 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 NMUR1Q9HB89 426 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 KANSL3Q9P2N6 904 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PSMC3IPQ9P2W1 217 aaPredicted RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 SCN5AQ14524 2016 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 TCRBV9S1A1TA0A576 114 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 TMEM189-UBE2V1I3L0A0 370 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 F9P00740 461 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 MAGEA6P43360 314 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 AIF1P55008 147 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 ARPP19P56211 112 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 BFSP2Q13515 415 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 FAM171A1Q5VUB5 890 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 BTBD8Q5XKL5 378 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 BZW1Q7L1Q6 419 aaKnown RBP13.97□□□□□ -0.17
UBE4B-206ENST00000466379 SCD5Q86SK9 330 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 PRPF39Q86UA1 669 aaKnown RBP13.97□□□□□ -0.17
UBE4B-206ENST00000466379 LRRC34Q8IZ02 419 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 CASD1Q96PB1 797 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 ZNF317Q96PQ6 595 aaPredicted RBP13.97□□□□□ -0.17
UBE4B-206ENST00000466379 GPR62Q9BZJ7 368 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 PNPLA8Q9NP80 782 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 RRN3Q9NYV6 651 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 OR12D3Q9UGF7 316 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 SLC24A2Q9UI40 661 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 COL4A4P53420 1690 aaPredicted RBP13.97□□□□□ -0.17
UBE4B-206ENST00000466379 MYO18AQ92614 2054 aaKnown RBP13.97□□□□□ -0.17
UBE4B-206ENST00000466379 A0A1W2PQH9 124 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 KCNK1O00180 336 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 DNM1LO00429 736 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 SOAT2O75908 522 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 LRIG2O94898 1065 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 OAZ2O95190 189 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 SRGAP2BP0DMP2 458 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 PDK1Q15118 436 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 CTXN3Q4LDR2 81 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 CPLX4Q7Z7G2 160 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 CASP10Q92851 521 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 SIK2Q9H0K1 926 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 PLAC1Q9HBJ0 212 aa13.97□□□□□ -0.17
UBE4B-206ENST00000466379 ATP2A2P16615 1042 aaKnown RBP13.96□□□□□ -0.17
UBE4B-206ENST00000466379 PSMB4P28070 264 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 EPHB2P29323 1055 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 MSH2P43246 934 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 CCL23P55773 120 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 SEMA5AQ13591 1074 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 KLHL38Q2WGJ6 581 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 KBTBD12Q3ZCT8 623 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 ZNF567Q8N184 647 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 SCML4Q8N228 414 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 ATAD1Q8NBU5 361 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 DCAKDQ8WVC6 231 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 OSER1Q9NX31 292 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 MARCH5Q9NX47 278 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 ZC3H7BQ9UGR2 993 aaKnown RBP13.96□□□□□ -0.17
UBE4B-206ENST00000466379 ADAM28Q9UKQ2 775 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 LRFN2Q9ULH4 789 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 TTLL3Q9Y4R7 772 aa13.96□□□□□ -0.17
UBE4B-206ENST00000466379 SF3B1O75533 1304 aaKnown RBP eCLIP13.96□□□□□ -0.18
UBE4B-206ENST00000466379 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 IGLV3-25P01717 112 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 VIMP08670 466 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 TPSB2P20231 275 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 SLC11A1P49279 550 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 GLUD2P49448 558 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 USP46P62068 366 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 TPSAB1Q15661 275 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 C4orf22Q6V702 233 aa13.95□□□□□ -0.18
UBE4B-206ENST00000466379 DCP1BQ8IZD4 617 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 PDCD7Q8N8D1 485 aaKnown RBP13.95□□□□□ -0.18
UBE4B-206ENST00000466379 MCUQ8NE86 351 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms