RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 LPAR3Q9UBY5 353 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 FZD4Q9ULV1 537 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 SPATA31A1Q5TZJ5 1347 aa4.91□□□□□ -1.62
LRCH3-211ENST00000466054 EFCAB8A8MWE9 144 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 SOCS2O14508 198 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 CA12O43570 354 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 EXOC3O60645 756 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 ACTL6BO94805 426 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 MT-CO3P00414 261 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 APEHP13798 732 aaKnown RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 VEGFAP15692 232 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 KLRK1P26718 216 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 DUSP1P28562 367 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 RENBPP51606 427 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 AP2B1P63010 937 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 GPC5P78333 572 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 PRKG1Q13976 671 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 FAM187BQ17R55 369 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 PROSER3Q2NL68 480 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 P3H1Q32P28 736 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 INO80DQ53TQ3 878 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 ACSM6Q6P461 480 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 RFX8Q6ZV50 586 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 MEPCEQ7L2J0 689 aaKnown RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 RAB11FIP2Q7L804 512 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 KRT27Q7Z3Y8 459 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 SLC44A2Q8IWA5 706 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 CCDC117Q8IWD4 279 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 GALNT15Q8N3T1 639 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 ANKRD42Q8N9B4 389 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 GLMPQ8WWB7 406 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 RNF26Q9BY78 433 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 SAP30LQ9HAJ7 183 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 USP29Q9HBJ7 922 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 PRDM8Q9NQV8 689 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 FBXO28Q9NVF7 368 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 GRHPRQ9UBQ7 328 aa4.9□□□□□ -1.63
LRCH3-211ENST00000466054 MORC2Q9Y6X9 1032 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-211ENST00000466054 POC1B-GALNT4F8VUJ3 575 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 UBE2Q2LH0YL09 131 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 LARGE1O95461 756 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 CHRM5P08912 532 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 AKT1P31749 480 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 IGHMBP2P38935 993 aaKnown RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 COPB1P53618 953 aaKnown RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 CBFBQ13951 182 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 TRIP6Q15654 476 aaKnown RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 LIN54Q6MZP7 749 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 NFRKBQ6P4R8 1299 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 GALNT4Q8N4A0 578 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 OR52L2PQ8NGH6 319 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 ADAMTS18Q8TE60 1221 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 SLC22A17Q8WUG5 538 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 KAZALD1Q96I82 304 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 FAR2Q96K12 515 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 MARK4Q96L34 752 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 CCDC17Q96LX7 622 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 MACROD1Q9BQ69 325 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 DDX23Q9BUQ8 820 aaKnown RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 PABPC3Q9H361 631 aaKnown RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 ASIC5Q9NY37 505 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 SEMA5BQ9P283 1151 aa4.89□□□□□ -1.63
LRCH3-211ENST00000466054 C19orf53Q9UNZ5 99 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-211ENST00000466054 LOC105369274A0A096LPK9 316 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 LOC102723532A0A0G2JNH3 316 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 SMIM35A0A1B0GVV1 85 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 FAM90A18PA6NE21 464 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 FAM90A16PA6NEW6 464 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 FAM90A9PA6NNJ1 464 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 FAM90A5PA8MXJ8 464 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 PIP5K1CO60331 668 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 PRAMEF2O60811 474 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 RPP40O75818 363 aaKnown RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 CER1O95813 267 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 FAM90A15PP0C7V4 464 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 FAM90A14PP0C7W9 464 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 JAK3P52333 1124 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 LARS2Q15031 903 aaKnown RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 SULT6B1Q6IMI4 303 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 SERPINA13PQ6UXR4 307 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 MRPL10Q7Z7H8 261 aaKnown RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 OR4N4Q8N0Y3 316 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 OR1N1Q8NGS0 311 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 MAFAQ8NHW3 353 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 TRIM63Q969Q1 353 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 HIC2Q96JB3 615 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 HS6ST2Q96MM7 605 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 SORBS1Q9BX66 1292 aaKnown RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 SAYSD1Q9NPB0 183 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 TRNAU1APQ9NX07 287 aaKnown RBP4.88□□□□□ -1.63
LRCH3-211ENST00000466054 CNTN6Q9UQ52 1028 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 AFG3L2Q9Y4W6 797 aa4.88□□□□□ -1.63
LRCH3-211ENST00000466054 TCRBV5S1A1TA0A578 114 aa4.87□□□□□ -1.63
LRCH3-211ENST00000466054 TTC34A8MYJ7 566 aa4.87□□□□□ -1.63
LRCH3-211ENST00000466054 TISP43B9A030 160 aa4.87□□□□□ -1.63
LRCH3-211ENST00000466054 PRRT4C9JH25 899 aa4.87□□□□□ -1.63
LRCH3-211ENST00000466054 NKX2-8O15522 239 aa4.87□□□□□ -1.63
LRCH3-211ENST00000466054 GCATO75600 419 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms