RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 C10orf107Q8IVU9 208 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 CDKL3Q8IVW4 592 aaPredicted RBP20.3■□□□□ 0.84
SDF4-205ENST00000465727 TMEM143Q96AN5 459 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 CLMNQ96JQ2 1002 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 CNBD2Q96M20 576 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 PRPF18Q99633 342 aaKnown RBP20.3■□□□□ 0.84
SDF4-205ENST00000465727 HAUS8Q9BT25 410 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 RHBDL2Q9NX52 303 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 CNOT11Q9UKZ1 510 aaKnown RBP20.3■□□□□ 0.84
SDF4-205ENST00000465727 AK5Q9Y6K8 562 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 TPP1O14773 563 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 RALBP11234 206 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 ATP6V1B1P15313 513 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 NUMBP49757 651 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 EMP3P54852 163 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 SCARA5Q6ZMJ2 495 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 CDHR1Q96JP9 859 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 ADPGKQ9BRR6 497 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 PCDHB12Q9Y5F1 795 aa20.3■□□□□ 0.84
SDF4-205ENST00000465727 GCATO75600 419 aa20.29■□□□□ 0.84
SDF4-205ENST00000465727 ITGBL1O95965 494 aaPredicted RBP20.29■□□□□ 0.84
SDF4-205ENST00000465727 GPD1P21695 349 aa20.29■□□□□ 0.84
SDF4-205ENST00000465727 ACTR2P61160 394 aa20.29■□□□□ 0.84
SDF4-205ENST00000465727 NIPAL4Q0D2K0 466 aa20.29■□□□□ 0.84
SDF4-205ENST00000465727 SLC9A4Q6AI14 798 aa20.29■□□□□ 0.84
SDF4-205ENST00000465727 GNEQ9Y223 722 aaKnown RBP20.29■□□□□ 0.84
SDF4-205ENST00000465727 DOCK5Q9H7D0 1870 aa20.29■□□□□ 0.84
SDF4-205ENST00000465727 GPR25O00155 361 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 SLC22A2O15244 555 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 NR3C2P08235 984 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 CDH2P19022 906 aaPredicted RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 SLC5A2P31639 672 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 FLOT2Q14254 428 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 CCDC153Q494R4 210 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 PACS1Q6VY07 963 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 CNDP1Q96KN2 507 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 INO80BQ9C086 356 aaPredicted RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 XYLT2Q9H1B5 865 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 XPNPEP3Q9NQH7 507 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 APPL1Q9UKG1 709 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 HEY1Q9Y5J3 304 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 ZBTB14O43829 449 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 SEZ6Q53EL9 994 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 BOLA3Q53S33 107 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 FAM102AQ5T9C2 384 aaPredicted RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 VWA5B1Q5TIE3 1220 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 BNC2Q6ZN30 1099 aaPredicted RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 SETD3Q86TU7 594 aaPredicted RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 ERI1Q8IV48 349 aaKnown RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 CROCCP3Q8IVE0 287 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 MPP5Q8N3R9 675 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 TRIM56Q9BRZ2 755 aaKnown RBP20.28■□□□□ 0.84
SDF4-205ENST00000465727 CDH19Q9H159 772 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 COG4Q9H9E3 785 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 TBCCD1Q9NVR7 557 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 CEPT1Q9Y6K0 416 aa20.28■□□□□ 0.84
SDF4-205ENST00000465727 ZNF487B1APH4 448 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 H0YJX3 145 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 EDN1P05305 212 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 MLNP12872 115 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 TPP2P29144 1249 aaPredicted RBP20.27■□□□□ 0.84
SDF4-205ENST00000465727 TNFSF9P41273 254 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 PEX6Q13608 980 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 ZNF554Q86TJ5 538 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 PQLC3Q8N755 202 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 EFCAB3Q8N7B9 438 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 KYQ8NBH2 561 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 ZNF341Q9BYN7 854 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 SLC2A11Q9BYW1 496 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 VPS33BQ9H267 617 aa20.27■□□□□ 0.84
SDF4-205ENST00000465727 hCG_2014768A0A024R1R8 64 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 RGSL1A5PLK6 1076 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 TMEM114B3SHH9 223 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 HMGCRP04035 888 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 SUPT20HL2P0C7V6 817 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 GLDCP23378 1020 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 IL4RP24394 825 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 ARRB2P32121 409 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 PPIDQ08752 370 aaKnown RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 SEMA5AQ13591 1074 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 SUPT20HL1Q3ZLR7 823 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 ATG14Q6ZNE5 492 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 TRPC4APQ8TEL6 797 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 KBTBD7Q8WVZ9 684 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 SREK1Q8WXA9 508 aaKnown RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 TBCBQ99426 244 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 RSL24D1Q9UHA3 163 aaKnown RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 CNTNAP1P78357 1384 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 C2CD4BA6NLJ0 364 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 ZMPSTE24O75844 475 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 PRKCGP05129 697 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 ZNF23P17027 643 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 PCSK6P29122 969 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 NUDT2P50583 147 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 PIGGQ5H8A4 983 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 TSHZ1Q6ZSZ6 1077 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 CEP70Q8NHQ1 597 aa20.26■□□□□ 0.83
SDF4-205ENST00000465727 RP9Q8TA86 221 aaKnown RBP20.26■□□□□ 0.83
SDF4-205ENST00000465727 BIRC8Q96P09 236 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms