RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 FAM102AQ5T9C2 384 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 STPG1Q5TH74 334 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 KLHDC10Q6PID8 442 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 H2AFVQ71UI9 128 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 SLC26A9Q7LBE3 791 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 DDX42Q86XP3 938 aaKnown RBP eCLIP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 LRRC8AQ8IWT6 810 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 MCOLN2Q8IZK6 566 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 CALR3Q96L12 384 aaKnown RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 EIF3CQ99613 913 aaKnown RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 CHP1Q99653 195 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 SELENOOQ9BVL4 669 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 SMOC1Q9H4F8 434 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 VPS45Q9NRW7 570 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 GMIPQ9P107 970 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 CHORDC1Q9UHD1 332 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 EPN1Q9Y6I3 576 aaPredicted RBP18.18■□□□□ 0.5
CPSF4-209ENST00000465132 CACNA1BQ00975 2339 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 SDK1Q7Z5N4 2213 aa18.18■□□□□ 0.5
CPSF4-209ENST00000465132 DCLK1O15075 740 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 PAPSS1O43252 624 aaPredicted RBP18.17■□□□□ 0.5
CPSF4-209ENST00000465132 ERBB2P04626 1255 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 ZXDBP98169 803 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
CPSF4-209ENST00000465132 ELF2Q15723 593 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 BSPRYQ5W0U4 402 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 DNAJC24Q6P3W2 148 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 MON1BQ7L1V2 547 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 C3orf20Q8ND61 904 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 CCDC26Q8TAB7 109 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 STAP1Q9ULZ2 295 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 PAXBP1Q9Y5B6 917 aa18.17■□□□□ 0.5
CPSF4-209ENST00000465132 ATG2BQ96BY7 2078 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 LEFTY2O00292 366 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 NDUFA10O95299 355 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 LCA5LO95447 670 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 KRT3P12035 628 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 RARGP13631 454 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 GBP1P32455 592 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 OPRD1P41143 372 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 MTA1Q13330 715 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 OLFML1Q6UWY5 402 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 FAM183BPQ6ZVS7 135 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 XYLT1Q86Y38 959 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 USP33Q8TEY7 942 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 ZNF653Q96CK0 615 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 NCAPGQ9BPX3 1015 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 DNMT3LQ9UJW3 386 aa18.16■□□□□ 0.5
CPSF4-209ENST00000465132 SPAG17Q6Q759 2223 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 A0A1W2PQH9 124 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 YJEFN3A6XGL0 299 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 E7ENQ6 273 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 K7EQS6 105 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 PIK3R2O00459 728 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 TLR5O60602 858 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 NCAM1P13591 858 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 SLC7A9P82251 487 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 COG7P83436 770 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 GAB4Q2WGN9 574 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 N4BP2L1Q5TBK1 243 aaPredicted RBP18.15■□□□□ 0.5
CPSF4-209ENST00000465132 TCEAL6Q6IPX3 200 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 RHOT2Q8IXI1 618 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 KIAA1958Q8N8K9 716 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 TSTD1Q8NFU3 115 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 TCEAL3Q969E4 200 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 RNF38Q9H0F5 515 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.15■□□□□ 0.5
CPSF4-209ENST00000465132 CNOT8Q9UFF9 292 aaKnown RBP18.15■□□□□ 0.5
CPSF4-209ENST00000465132 ANAPC1Q9H1A4 1944 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 EML5Q05BV3 1969 aa18.15■□□□□ 0.5
CPSF4-209ENST00000465132 KMT2BQ9UMN6 2715 aaPredicted RBP18.14■□□□□ 0.49
CPSF4-209ENST00000465132 SIGLEC16A6NMB1 481 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 GOLGA8SH3BPF8 625 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 DAB1O75553 588 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 OLFM2O95897 454 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 F9P00740 461 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 TMEM253P0C7T8 217 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 NOS2P35228 1153 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 MATKP42679 507 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 MAGEA1P43355 309 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 DGKEP52429 567 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 CREB5Q02930 508 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 ST3GAL2Q16842 350 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 C2orf27AQ580R0 203 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 C10orf120Q5SQS8 335 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 SND1Q7KZF4 910 aaKnown RBP eCLIP18.14■□□□□ 0.49
CPSF4-209ENST00000465132 SERPINB11Q96P15 392 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 PPP1R9BQ96SB3 815 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 SPTLC3Q9NUV7 552 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.14■□□□□ 0.49
CPSF4-209ENST00000465132 UVRAGQ9P2Y5 699 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 CPQQ9Y646 472 aa18.14■□□□□ 0.49
CPSF4-209ENST00000465132 BCLAF3A2AJT9 711 aaKnown RBP18.13■□□□□ 0.49
CPSF4-209ENST00000465132 ANTXRLA6NF34 631 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 SOWAHDA6NJG2 315 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 OAS1P00973 400 aaKnown RBP18.13■□□□□ 0.49
CPSF4-209ENST00000465132 CYP17A1P05093 508 aa18.13■□□□□ 0.49
CPSF4-209ENST00000465132 SLC2A3P11169 496 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms