RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 COL5A1P20908 1838 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-210ENST00000464078 TP53BP1Q12888 1972 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-210ENST00000464078 KNTC1P50748 2209 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 PAPSS1O43252 624 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 TNFSF14O43557 240 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 RHOBTB3O94955 611 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 SEMA4FO95754 770 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 PFKFB1P16118 471 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 RPL13P26373 211 aaKnown RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 PSMC2P35998 433 aaKnown RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 HARS2P49590 506 aaKnown RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 CCT8P50990 548 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 CAMK2BQ13554 666 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 PTPRNQ16849 979 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 ADIPOR2Q86V24 386 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 ARID3AQ99856 593 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 IRX2Q9BZI1 471 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-210ENST00000464078 PLA2G4CQ9UP65 541 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 HPSEQ9Y251 543 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 SNX11Q9Y5W9 270 aa18.05■□□□□ 0.48
HMGN1-210ENST00000464078 CFAP46Q8IYW2 2715 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 TSPAN3O60637 253 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 CMA1P23946 247 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 CD27P26842 260 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 MXI1P50539 228 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 SMAD1Q15797 465 aaKnown RBP18.04■□□□□ 0.48
HMGN1-210ENST00000464078 ZCWPW2Q504Y3 356 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 FNDC3BQ53EP0 1204 aaKnown RBP18.04■□□□□ 0.48
HMGN1-210ENST00000464078 ADGRF1Q5T601 910 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 FMNL3Q8IVF7 1028 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 AHI1Q8N157 1196 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 GUF1Q8N442 669 aaKnown RBP18.04■□□□□ 0.48
HMGN1-210ENST00000464078 FBXL13Q8NEE6 735 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 SEMA4DQ92854 862 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 BIRC7Q96CA5 298 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 ULBP1Q9BZM6 244 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 BTBD1Q9H0C5 482 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 GGA2Q9UJY4 613 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 ANKRD6Q9Y2G4 727 aa18.04■□□□□ 0.48
HMGN1-210ENST00000464078 A0A087WV48 116 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 XPO1O14980 1071 aaKnown RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 DLDP09622 509 aaKnown RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 PABPC1P11940 636 aaKnown RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 CTSKP43235 329 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 BCAT1P54687 386 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 RPS14P62263 151 aaKnown RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 TTC31Q49AM3 519 aaPredicted RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 MPP7Q5T2T1 576 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 CHST9Q7L1S5 443 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 SCUBE3Q8IX30 993 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 CYB5D2Q8WUJ1 264 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 GOLGA1Q92805 767 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 SNX21Q969T3 373 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 ORAI3Q9BRQ5 295 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 MMRN2Q9H8L6 949 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 SGK2Q9HBY8 427 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 PRSS16Q9NQE7 514 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 ABCB8Q9NUT2 735 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
HMGN1-210ENST00000464078 ASXL3Q9C0F0 2248 aa18.03■□□□□ 0.48
HMGN1-210ENST00000464078 A0A1B0GVL5 298 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 E9PAM4 449 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 DFNA5O60443 496 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 DNTTP04053 509 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 EDRF1Q3B7T1 1238 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 INAVAQ3KP66 663 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 USP30Q70CQ3 517 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 ZC3H3Q8IXZ2 948 aaKnown RBP18.02■□□□□ 0.48
HMGN1-210ENST00000464078 SCML4Q8N228 414 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 ZNF366Q8N895 744 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 ZNF557Q8N988 423 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-210ENST00000464078 ENGASEQ8NFI3 743 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 HNRNPLLQ8WVV9 542 aaKnown RBP18.02■□□□□ 0.48
HMGN1-210ENST00000464078 TMA16Q96EY4 203 aaKnown RBP18.02■□□□□ 0.48
HMGN1-210ENST00000464078 RAB20Q9NX57 234 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 TSPAN16Q9UKR8 245 aa18.02■□□□□ 0.48
HMGN1-210ENST00000464078 PLXNA2O75051 1894 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 ASH1LQ9NR48 2969 aaKnown RBP18.01■□□□□ 0.47
HMGN1-210ENST00000464078 FAM237AA0A1B0GTK4 181 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 TRABD2BA6NFA1 517 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 H0Y8X5 98 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 TULP2O00295 520 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 STX10O60499 249 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 ATP5BP06576 529 aaKnown RBP18.01■□□□□ 0.47
HMGN1-210ENST00000464078 ADIGQ0VDE8 80 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 BST2Q10589 180 aaKnown RBP18.01■□□□□ 0.47
HMGN1-210ENST00000464078 DPYDQ12882 1025 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 ADAM9Q13443 819 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 GOLGA7BQ2TAP0 167 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 BSPRYQ5W0U4 402 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 MBLAC2Q68D91 279 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 ZNF776Q68DI1 518 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-210ENST00000464078 MSANTD2Q6P1R3 559 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 PDCD7Q8N8D1 485 aaKnown RBP18.01■□□□□ 0.47
HMGN1-210ENST00000464078 RNF139Q8WU17 664 aa18.01■□□□□ 0.47
HMGN1-210ENST00000464078 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms