RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TBL1XO60907 577 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 HSF2BPO75031 334 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 TFE3P19532 575 aaPredicted RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 GABRB2P47870 512 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 RPS24P62847 133 aaKnown RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 SPEM2Q0P670 501 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 IQCB1Q15051 598 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 OTUD1Q5VV17 481 aaPredicted RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 TRMT11Q7Z4G4 463 aaKnown RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 ANKS1BQ7Z6G8 1248 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 CFAP52Q8N1V2 620 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 ZC3H10Q96K80 434 aaKnown RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 PCMTD1Q96MG8 357 aaPredicted RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 GABRG3Q99928 467 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 DUSP15Q9H1R2 295 aaPredicted RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 POLMQ9NP87 494 aaPredicted RBP13.46□□□□□ -0.25
XRN1-203ENST00000463916 ELOVL2Q9NXB9 296 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 COX16Q9P0S2 106 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 STIM2Q9P246 746 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 SPAG17Q6Q759 2223 aa13.46□□□□□ -0.25
XRN1-203ENST00000463916 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 RETP07949 1114 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 GABRG2P18507 467 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 BCKDHBP21953 392 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 IL12RB1P42701 662 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 RNASE9P60153 205 aaKnown RBP13.46□□□□□ -0.26
XRN1-203ENST00000463916 NOMO3P69849 1222 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 FMO1Q01740 532 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 PLK5Q496M5 336 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 MS4A13Q5J8X5 152 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 NAA35Q5VZE5 725 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 ADIPOR2Q86V24 386 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 ERICH1Q86X53 443 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 XYLT1Q86Y38 959 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 NEK11Q8NG66 645 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.26
XRN1-203ENST00000463916 C18orf8Q96DM3 657 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 SLC6A17Q9H1V8 727 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 ABCB8Q9NUT2 735 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 DDIT4Q9NX09 232 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 THAP10Q9P2Z0 257 aaPredicted RBP13.46□□□□□ -0.26
XRN1-203ENST00000463916 GMEB2Q9UKD1 530 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 STON1Q9Y6Q2 735 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 CEP250Q9BV73 2442 aa13.46□□□□□ -0.26
XRN1-203ENST00000463916 ALDH1A2O94788 518 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 CD70P32970 193 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 ZNF445P59923 1031 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 CDK17Q00537 523 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 CDR2Q01850 454 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 CCDC6Q16204 474 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 USP39Q53GS9 565 aaKnown RBP13.45□□□□□ -0.26
XRN1-203ENST00000463916 MPP7Q5T2T1 576 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 RAP1GAP2Q684P5 730 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 KIAA0907Q7Z7F0 614 aaPredicted RBP13.45□□□□□ -0.26
XRN1-203ENST00000463916 ZNF397Q8NF99 534 aaPredicted RBP13.45□□□□□ -0.26
XRN1-203ENST00000463916 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 NAP1L5Q96NT1 182 aaPredicted RBP13.45□□□□□ -0.26
XRN1-203ENST00000463916 SPAG5Q96R06 1193 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 PCDHB18PQ96TA0 734 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 CIPCQ9C0C6 399 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
XRN1-203ENST00000463916 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
XRN1-203ENST00000463916 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
XRN1-203ENST00000463916 DAB1O75553 588 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 LSM8O95777 96 aaKnown RBP13.44□□□□□ -0.26
XRN1-203ENST00000463916 CYP1A1P04798 512 aaPredicted RBP13.44□□□□□ -0.26
XRN1-203ENST00000463916 NOS2P35228 1153 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 STAT1P42224 750 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 ARID5AQ03989 594 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 NME3Q13232 169 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 ENPP2Q13822 863 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 ZNF234Q14588 700 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 TRNP1Q6NT89 227 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 MMS22LQ6ZRQ5 1243 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 ZDHHC17Q8IUH5 632 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 PGBD3Q8N328 593 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 SLC30A5Q8TAD4 765 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 BTN2A3PQ96KV6 586 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 PRMT1Q99873 361 aaKnown RBP13.44□□□□□ -0.26
XRN1-203ENST00000463916 ARRDC1-AS1Q9H2J1 176 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 ANLNQ9NQW6 1124 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.44□□□□□ -0.26
XRN1-203ENST00000463916 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 I6L893 689 aaPredicted RBP13.44□□□□□ -0.26
XRN1-203ENST00000463916 M0QYT0 321 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 APOEP02649 317 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 NDUFV2P19404 249 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 P2RY2P41231 377 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 MATKP42679 507 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 SNX16P57768 344 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 MAP7D1Q3KQU3 841 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 SDE2Q6IQ49 451 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 ZNF677Q86XU0 584 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 LGI2Q8N0V4 545 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms