RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PTPAQ15257 358 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 IL17AQ16552 155 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 DUSP6Q16828 381 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 HSDL1Q3SXM5 330 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 SYCE2Q6PIF2 218 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 CMTR2Q8IYT2 770 aaKnown RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 LRRC15Q8TF66 581 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 SLC25A43Q8WUT9 341 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 POF1BQ8WVV4 589 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 SLC5A5Q92911 643 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 LENG9Q96B70 501 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 CDCA3Q99618 268 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 LSM14BQ9BX40 385 aaKnown RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 TLE6Q9H808 572 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 PSTPIP2Q9H939 334 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 TRPS1Q9UHF7 1281 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 PRSS50Q9UI38 385 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 BARX2Q9UMQ3 279 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 KMT2BQ9UMN6 2715 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 ACACBO00763 2458 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 CFAP47Q6ZTR5 3102 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 ABCB11O95342 1321 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 MYH15Q9Y2K3 1946 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FAM86B1E9PN63 330 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PER2O15055 1255 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FIBPO43427 364 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SCAF4O95104 1147 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 BAG4O95429 457 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FAM86B2P0C5J1 330 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 ZNF286BP0CG31 522 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SMIM10L2AP0DMW4 78 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SMIM10L2BP0DMW5 78 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 HOXB8P17481 243 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 INHBCP55103 352 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MRPS9P82933 396 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 OCRLQ01968 901 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 UBE3AQ05086 875 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 BTG3Q14201 252 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PITRM1Q5JRX3 1037 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 GPR158Q5T848 1215 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 KCNV1Q6PIU1 500 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 ABHD15Q6UXT9 468 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FRMD7Q6ZUT3 714 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 TAS1R1Q7RTX1 841 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 RBM23Q86U06 439 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 C11orf74Q86VG3 221 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 VRK3Q8IV63 474 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 AMER2Q8N7J2 671 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 C4orf32Q8N8J7 132 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 TBCKQ8TEA7 893 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SPATA33Q96N06 139 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 RMDN3Q96TC7 470 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SH3GLB2Q9NR46 395 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PLAAQ9Y263 795 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 NOC2LQ9Y3T9 749 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 COL4A4P53420 1690 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FRMPD4Q14CM0 1322 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 IGLV3-22A0A075B6J6 115 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 A0A1W2PR48 441 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FSD2A1L4K1 749 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PP2D1A8MPX8 630 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 GCOM1H8Y6P7 765 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PI15O43692 258 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PRAMEF4O60810 478 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 DNAJC6O75061 913 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 LMNAP02545 664 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 POLR2MP0CAP2 368 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 ARP10275 920 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MARCKSP29966 332 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 GYS2P54840 703 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 LGALS4P56470 323 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 DUSP2Q05923 314 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MGAT3Q09327 533 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MRPL49Q13405 166 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 LPIN1Q14693 890 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 ATP13A4Q4VNC1 1196 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SPECC1Q5M775 1068 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 ANKRD54Q6NXT1 300 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FAM43BQ6ZT52 329 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 USP49Q70CQ1 688 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 HTR3DQ70Z44 454 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 APBB1IPQ7Z5R6 666 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MRGPREQ86SM8 312 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SLC41A1Q8IVJ1 513 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 CMIPQ8IY22 773 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 CCDC105Q8IYK2 499 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 CCDC148Q8NFR7 591 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 WASF1Q92558 559 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 HAS1Q92839 578 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 CUL5Q93034 780 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 AGAP2Q99490 1192 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 PDCD2LQ9BRP1 358 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 FOXP1Q9H334 677 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 C6orf50Q9HD87 102 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 TOPORSQ9NS56 1045 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SETD4Q9NVD3 440 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 MRPL11Q9Y3B7 192 aaKnown RBP4.01□□□□□ -1.77
SCFD1-204ENST00000463622 SQORQ9Y6N5 450 aa4.01□□□□□ -1.77
SCFD1-204ENST00000463622 NUMBLQ9Y6R0 609 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms