RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 IL21RQ9HBE5 538 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 LHX6Q9UPM6 363 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 KNL1Q8NG31 2342 aa24.25■■□□□ 1.47
SSNA1-203ENST00000463511 LAMA5O15230 3695 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 TAF4O00268 1085 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 ACADMP11310 421 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 OXTRP30559 389 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 MXI1P50539 228 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 SERPINA13PQ6UXR4 307 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 RBBP8NLQ8NC74 664 aaPredicted RBP24.24■■□□□ 1.47
SSNA1-203ENST00000463511 FUCA2Q9BTY2 467 aa24.24■■□□□ 1.47
SSNA1-203ENST00000463511 EIF2B4Q9UI10 523 aaKnown RBP24.24■■□□□ 1.47
SSNA1-203ENST00000463511 SYCE3A1L190 88 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 BCAT2O15382 392 aaPredicted RBP24.23■■□□□ 1.47
SSNA1-203ENST00000463511 IGLV3-19P01714 112 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 GTF2H1P32780 548 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 TKTL1P51854 596 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 ARID5AQ03989 594 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 ARHGAP17Q68EM7 881 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 FAM124AQ86V42 546 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 PROSER1Q86XN7 944 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 FAM217AQ8IXS0 508 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 TTC39CQ8N584 583 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 FBXL13Q8NEE6 735 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 NDRG1Q92597 394 aaKnown RBP24.23■■□□□ 1.47
SSNA1-203ENST00000463511 PLD4Q96BZ4 506 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 NUP58Q9BVL2 599 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 SLC2A11Q9BYW1 496 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 UBXN6Q9BZV1 441 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 GAREM1Q9H706 876 aa24.23■■□□□ 1.47
SSNA1-203ENST00000463511 CABIN1Q9Y6J0 2220 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 NYNRINQ9P2P1 1898 aaKnown RBP24.22■■□□□ 1.47
SSNA1-203ENST00000463511 METTL12A8MUP2 240 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 TULP2O00295 520 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 CBFA2T3O75081 653 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 CER1O95813 267 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 ZBED1O96006 694 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 CAPNS1P04632 268 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 HLA-EP13747 358 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 SLC8A3P57103 927 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 BNC1Q01954 994 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 SCAPQ12770 1279 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 E2F5Q15329 346 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 ZSCAN23Q3MJ62 389 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 LRSAM1Q6UWE0 723 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 ANKRD52Q8NB46 1076 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 SETD7Q8WTS6 366 aaKnown RBP24.22■■□□□ 1.47
SSNA1-203ENST00000463511 TATDN2Q93075 761 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 ULBP1Q9BZM6 244 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 RAB20Q9NX57 234 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 PCOLCE2Q9UKZ9 415 aa24.22■■□□□ 1.47
SSNA1-203ENST00000463511 FNDC3AQ9Y2H6 1198 aaKnown RBP24.22■■□□□ 1.47
SSNA1-203ENST00000463511 PLXNA2O75051 1894 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 TSPAN3O60637 253 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 FGFR1OPO95684 399 aaKnown RBP24.21■■□□□ 1.47
SSNA1-203ENST00000463511 HOXD9P28356 352 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-203ENST00000463511 MATKP42679 507 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 GOLGA7BQ2TAP0 167 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 BHLHA9Q7RTU4 235 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 IRF2BP1Q8IU81 584 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 FMNL3Q8IVF7 1028 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 SNX19Q92543 992 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 FAXDC2Q96IV6 333 aa24.21■■□□□ 1.47
SSNA1-203ENST00000463511 ARMCX3Q9UH62 379 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-203ENST00000463511 APOBEC2Q9Y235 224 aaKnown RBP24.21■■□□□ 1.47
SSNA1-203ENST00000463511 CELSR3Q9NYQ7 3312 aa24.2■■□□□ 1.47
SSNA1-203ENST00000463511 TRIP4Q15650 581 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-203ENST00000463511 HLA-BQ31612 363 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 MPPE1Q53F39 396 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 PM20D1Q6GTS8 502 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 SLCO6A1Q86UG4 719 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 ZNF366Q8N895 744 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 ENOX1Q8TC92 643 aaKnown RBP24.2■■□□□ 1.46
SSNA1-203ENST00000463511 METTL14Q9HCE5 456 aaKnown RBP24.2■■□□□ 1.46
SSNA1-203ENST00000463511 TM7SF3Q9NS93 570 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 OLA1Q9NTK5 396 aaKnown RBP24.2■■□□□ 1.46
SSNA1-203ENST00000463511 TSPAN16Q9UKR8 245 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 SLCO1B1Q9Y6L6 691 aa24.2■■□□□ 1.46
SSNA1-203ENST00000463511 TIMM44O43615 452 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 GNA14O95837 355 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 ZNF883P0CG24 379 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 HLA-FP30511 346 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 HARS2P49590 506 aaKnown RBP24.19■■□□□ 1.46
SSNA1-203ENST00000463511 BCAT1P54687 386 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 MARSP56192 900 aaKnown RBP24.19■■□□□ 1.46
SSNA1-203ENST00000463511 PDE4CQ08493 712 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 ADIGQ0VDE8 80 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 CAMK2GQ13555 558 aaPredicted RBP24.19■■□□□ 1.46
SSNA1-203ENST00000463511 TPD52L1Q16890 204 aaPredicted RBP24.19■■□□□ 1.46
SSNA1-203ENST00000463511 CCDC40Q4G0X9 1142 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 ANO6Q4KMQ2 910 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 FNDC3BQ53EP0 1204 aaKnown RBP24.19■■□□□ 1.46
SSNA1-203ENST00000463511 GLRX5Q86SX6 157 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 OR2T3Q8NH03 318 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 C1orf216Q8TAB5 229 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 CYB5D2Q8WUJ1 264 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 C6orf106Q9H6K1 298 aaPredicted RBP24.19■■□□□ 1.46
SSNA1-203ENST00000463511 SFMBT1Q9UHJ3 866 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 ACACAQ13085 2346 aa24.19■■□□□ 1.46
SSNA1-203ENST00000463511 A0A1B0GVT2 93 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms