RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ZNF446Q9NWS9 450 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 CHCHD3Q9NX63 227 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 OBP2AQ9NY56 170 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 CPSF2Q9P2I0 782 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 IL17BQ9UHF5 180 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 DNMT3LQ9UJW3 386 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 EFR3BQ9Y2G0 817 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 STYXL1Q9Y6J8 313 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 SCN1AP35498 2009 aa6.33□□□□□ -1.4
SMARCC1-204ENST00000462198 AHCTF1Q8WYP5 2266 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 PCDH15Q96QU1 1955 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 BICDL2A1A5D9 508 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 FAM149AA5PLN7 773 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 ZNF233A6NK53 670 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 I3L4J1 428 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 PTGESO14684 152 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 RRP8O43159 456 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 TRAPPC3O43617 180 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SLC28A2O43868 658 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 EXOC3O60645 756 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CBFA2T3O75081 653 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 KRT38O76015 456 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 B3GAT3O94766 335 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SLU7O95391 586 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 NR3C1P04150 777 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 ITGB2P05107 769 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SYPP08247 313 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CXCL8P10145 99 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 ADSSP30520 456 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 EIF4A3P38919 411 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 P2RY2P41231 377 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 TNFSF9P41273 254 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 PLA2G4AP47712 749 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CCZ1BP86790 482 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CCZ1P86791 482 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 NAB2Q15742 525 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 ANO6Q4KMQ2 910 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 FILIP1LQ4L180 1135 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 C4orf17Q53FE4 359 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 GLRA4Q5JXX5 417 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SPDYCQ5MJ68 293 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 C6orf118Q5T5N4 469 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 C1QTNF12Q5T7M4 302 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 PEAR1Q5VY43 1037 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 LYSMD4Q5XG99 296 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 TPGS2Q68CL5 300 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CD300LGQ6UXG3 332 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CCAR2Q8N163 923 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 GALNT15Q8N3T1 639 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 DEFB119Q8N690 84 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 MLKLQ8NB16 471 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 XXYLT1Q8NBI6 393 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SPC24Q8NBT2 197 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 OLIG1Q8TAK6 271 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 ACDQ96AP0 544 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CNOT6LQ96LI5 555 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 C16orf45Q96MC5 204 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 P2RY13Q9BPV8 354 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 LRRC3Q9BY71 257 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SEMA4CQ9C0C4 833 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CXCL16Q9H2A7 254 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 KCTD10Q9H3F6 313 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 EBF3Q9H4W6 596 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 PLEKHA5Q9HAU0 1116 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 KIAA1586Q9HCI6 787 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 HPS4Q9NQG7 708 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 SLC38A7Q9NVC3 462 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 HSPBP1Q9NZL4 362 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 KLHL42Q9P2K6 505 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 IMPACTQ9P2X3 320 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CPSF3Q9UKF6 684 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 CTNND2Q9UQB3 1225 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 TRAF3IP3Q9Y228 551 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 FRMD4BQ9Y2L6 1034 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 FHOD1Q9Y613 1164 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 NUP210Q8TEM1 1887 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 TSC2P49815 1807 aa6.32□□□□□ -1.4
SMARCC1-204ENST00000462198 UTP20O75691 2785 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 KNL1Q8NG31 2342 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 MYO18AQ92614 2054 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SMIM28A0A1B0GU29 152 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 HMGB1P1B2RPK0 211 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 EREGO14944 169 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 XPOTO43592 962 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 TLX3O43711 291 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 FAM189A1O60320 539 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 GJB3O75712 270 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 IL18RAPO95256 599 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 PROCP04070 461 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ATXN1LP0C7T5 689 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 IMPDH2P12268 514 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 C6P13671 934 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 BMP6P22004 513 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 NR2F2P24468 414 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 HOXD12P35452 270 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 BRCC3P46736 316 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms