RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ABHD14A-ACY1A0A1B0GW23 586 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TJP3O95049 919 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 LUC7L3O95232 432 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 TRUB2O95900 331 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 CD53P19397 219 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 PTPN9P43378 593 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 KLF1Q13351 362 aaPredicted RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 DHX34Q14147 1143 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 SIX1Q15475 284 aaPredicted RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 CTXN3Q4LDR2 81 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 RAB6CQ53S08 254 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 DCAF6Q58WW2 860 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 SPOCD1Q6ZMY3 1216 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 GPRIN1Q7Z2K8 1008 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 GSPT2Q8IYD1 628 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 ARL6IP6Q8N6S5 226 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 C1orf54Q8WWF1 131 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 IFT81Q8WYA0 676 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 TRIM43Q96BQ3 446 aaPredicted RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 HERPUD2Q9BSE4 406 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 RAB6CQ9H0N0 254 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 SLC40A1Q9NP59 571 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 CNGB3Q9NQW8 809 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.73□□□□□ -0.69
HERC4-207ENST00000460168 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.73□□□□□ -0.69
HERC4-207ENST00000460168 ABI2Q9NYB9 513 aaPredicted RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 TBK1Q9UHD2 729 aa10.73□□□□□ -0.69
HERC4-207ENST00000460168 LAMA2P24043 3122 aaKnown RBP10.73□□□□□ -0.69
HERC4-207ENST00000460168 CAPN9O14815 690 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 DGKIO75912 1065 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 USP17L7P0C7H9 530 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 GRIK1P39086 918 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 MATKP42679 507 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 CDKN2BP42772 138 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 NFE2Q16621 373 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 CYP1B1Q16678 543 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 RAB41Q5JT25 222 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 CCNI2Q6ZMN8 369 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 ANKS1BQ7Z6G8 1248 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 EXOC3L1Q86VI1 746 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 TMEM173Q86WV6 379 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 DEFB106AQ8N104 65 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 TMEM199Q8N511 208 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 ATG4AQ8WYN0 398 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 VWCEQ96DN2 955 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 PEBP4Q96S96 227 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 CALN1Q9BXU9 219 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 RAB17Q9H0T7 212 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 SEMA4AQ9H3S1 761 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 POPDC2Q9HBU9 364 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 RASAL2Q9UJF2 1139 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 VWA8A3KMH1 1905 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 hCG_1818297A0A087WSY0 165 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 KIAA0355O15063 1070 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 DIAPH2O60879 1101 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 DAB1O75553 588 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 ZBED1O96006 694 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 AMHP03971 560 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 TFE3P19532 575 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 KDELR1P24390 212 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 CYP2F1P24903 491 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 COILP38432 576 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 KCNJ1P48048 391 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 SULT1E1P49888 294 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 DAOAP59103 153 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 SULT2A1Q06520 285 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 LBRQ14739 615 aaKnown RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 SPOUT1Q5T280 376 aaKnown RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 MFSD5Q6N075 450 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 TTC27Q6P3X3 843 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 C12orf50Q8NA57 414 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 NSMCE1Q8WV22 266 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 TOP1MTQ969P6 601 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 RUNDC3BQ96NL0 473 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 TRIM51Q9BSJ1 452 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 DDX23Q9BUQ8 820 aaKnown RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 LRRC19Q9H756 370 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 GDF3Q9NR23 364 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 CHST7Q9NS84 486 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 PCYOX1Q9UHG3 505 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 STAP1Q9ULZ2 295 aa10.72□□□□□ -0.69
HERC4-207ENST00000460168 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
HERC4-207ENST00000460168 NLRC5Q86WI3 1866 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 YJEFN3A6XGL0 299 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 HHLA1C9JL84 531 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 E7ENQ6 273 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 TEX28O15482 410 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 ACRP10323 421 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 CPB1P15086 417 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 NOS2P35228 1153 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 CD97P48960 835 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 CARSP49589 748 aaKnown RBP10.71□□□□□ -0.69
HERC4-207ENST00000460168 CDH6P55285 790 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 ARPP19P56211 112 aa10.71□□□□□ -0.69
HERC4-207ENST00000460168 IFRD2Q12894 506 aaPredicted RBP10.71□□□□□ -0.69
HERC4-207ENST00000460168 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms