RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 MON1BQ7L1V2 547 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 MIB1Q86YT6 1006 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 MCOLN2Q8IZK6 566 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 CAMKK1Q8N5S9 505 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 TXNDC5Q8NBS9 432 aaKnown RBP16.25■□□□□ 0.19
SDF4-204ENST00000459994 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
SDF4-204ENST00000459994 C18orf8Q96DM3 657 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 CPXM1Q96SM3 734 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 ARRDC1-AS1Q9H2J1 176 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 LRRC4Q9HBW1 653 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 ARHGEF4Q9NR80 690 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 RXFP3Q9NSD7 469 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 ADAM22Q9P0K1 906 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 INTUQ9ULD6 942 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 MMP17Q9ULZ9 603 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 CCDC163A0A0D9SF12 145 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 ANKRD62A6NC57 917 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 TMCO5BA8MYB1 307 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 HOXC11O43248 304 aaPredicted RBP16.24■□□□□ 0.19
SDF4-204ENST00000459994 GABBR2O75899 941 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 STC2O76061 302 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 APBB3O95704 486 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 KLKB1P03952 638 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 APODP05090 189 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 HMBSP08397 361 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 BCKDHBP21953 392 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 MAGEA1P43355 309 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 RGS7P49802 495 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 DGKEP52429 567 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 ATXN1P54253 815 aaKnown RBP16.24■□□□□ 0.19
SDF4-204ENST00000459994 SF3A2Q15428 464 aaKnown RBP16.24■□□□□ 0.19
SDF4-204ENST00000459994 C10orf120Q5SQS8 335 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 Q6ZNB5 142 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 SCML4Q8N228 414 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 FRMD1Q8N878 549 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 MDGA1Q8NFP4 955 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 ACDQ96AP0 544 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 OTUB2Q96DC9 234 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 ERLEC1Q96DZ1 483 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 DUSP15Q9H1R2 295 aaPredicted RBP16.24■□□□□ 0.19
SDF4-204ENST00000459994 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 WDR35Q9P2L0 1181 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 STRIP2Q9ULQ0 834 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 REXO2Q9Y3B8 237 aaKnown RBP16.24■□□□□ 0.19
SDF4-204ENST00000459994 PCDHA13Q9Y5I0 950 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 ADGRG1Q9Y653 693 aa16.24■□□□□ 0.19
SDF4-204ENST00000459994 CACNA1AO00555 2505 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 E5RJQ4 531 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 NEDD8-MDP1E9PL57 170 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 FBXO21O94952 628 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 MYBL1P10243 752 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 EIF2DP41214 584 aaKnown RBP16.23■□□□□ 0.19
SDF4-204ENST00000459994 GALCP54803 685 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
SDF4-204ENST00000459994 PUM1Q14671 1186 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■■□□ 16.2
SDF4-204ENST00000459994 CRY1Q16526 586 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 PLK5Q496M5 336 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 ANO7Q6IWH7 933 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 PRR23CQ6ZRP0 262 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 MMS22LQ6ZRQ5 1243 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 DGLUCYQ7Z3D6 616 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 RASSF3Q86WH2 238 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 ZDHHC17Q8IUH5 632 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 TSTD1Q8NFU3 115 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 BHMTQ93088 406 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 C11orf70Q9BRQ4 267 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 ULBP1Q9BZM6 244 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 SYNCQ9H7C4 482 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 CNGB3Q9NQW8 809 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 PLK2Q9NYY3 685 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 EBF1Q9UH73 591 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 RASAL2Q9UJF2 1139 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 DNMT3LQ9UJW3 386 aa16.23■□□□□ 0.19
SDF4-204ENST00000459994 LAMA1P25391 3075 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 DCDC2BA2VCK2 349 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 EPN2O95208 641 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 ERBB2P04626 1255 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 TMEM253P0C7T8 217 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 SCNN1AP37088 669 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 GRIA2P42262 883 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 WASP42768 502 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 TKTL1P51854 596 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 MRPS21P82921 87 aaKnown RBP16.22■□□□□ 0.19
SDF4-204ENST00000459994 EFEMP1Q12805 493 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 CSRP2Q16527 193 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 PM20D1Q6GTS8 502 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 KLHDC10Q6PID8 442 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 ERMP1Q7Z2K6 904 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 SIX6OS1Q8N1H7 587 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 TXLNBQ8N3L3 684 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 GPR161Q8N6U8 529 aaKnown RBP16.22■□□□□ 0.19
SDF4-204ENST00000459994 TERB1Q8NA31 727 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 ACRBPQ8NEB7 543 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 RLN3Q8WXF3 142 aa16.22■□□□□ 0.19
SDF4-204ENST00000459994 ACOX2Q99424 681 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms