RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SYCP2LQ5T4T6 812 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 STEAP4Q687X5 459 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 TRMT10BQ6PF06 316 aaKnown RBP8.76□□□□□ -1.01
VPS50-208ENST00000458707 UGT2A3Q6UWM9 527 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 SCARA5Q6ZMJ2 495 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 PQLC3Q8N755 202 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 NAT14Q8WUY8 206 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 PYDC1Q8WXC3 89 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 PPP1R14BQ96C90 147 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 OPTNQ96CV9 577 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 ATG4CQ96DT6 458 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 WNK4Q96J92 1243 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 ACO2Q99798 780 aaKnown RBP8.76□□□□□ -1.01
VPS50-208ENST00000458707 NRDE2Q9H7Z3 1164 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 CDH22Q9UJ99 828 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 EMCNQ9ULC0 261 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 APOBEC2Q9Y235 224 aaKnown RBP8.76□□□□□ -1.01
VPS50-208ENST00000458707 RALGAPA2Q2PPJ7 1873 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 ARHGAP42A6NI28 874 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 C2CD4BA6NLJ0 364 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ITM2AO43736 263 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 GLRA3O75311 464 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 MAFO75444 373 aaPredicted RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 ALDH1A2O94788 518 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ZBED1O96006 694 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 APRTP07741 180 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 PROZP22891 400 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ACAT1P24752 427 aaKnown RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 RBL1P28749 1068 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 GPD2P43304 727 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 SLC1A6P48664 564 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 AQP4P55087 323 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 PTPN11Q06124 597 aaPredicted RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 ITGA9Q13797 1035 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ANKRD20A4Q4UJ75 823 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 CCDC92Q53HC0 331 aaPredicted RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 RALGPS1Q5JS13 557 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 CFAP157Q5JU67 520 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 MROH9Q5TGP6 573 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 TRNP1Q6NT89 227 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ZCCHC23Q6ZST2 131 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 MAVSQ7Z434 540 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 KBTBD6Q86V97 674 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 MAP7D3Q8IWC1 876 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 GDPD5Q8WTR4 605 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ZDHHC16Q969W1 377 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 SORT1Q99523 831 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 MPHOSPH6Q99547 160 aaKnown RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 ADPGKQ9BRR6 497 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 APOL6Q9BWW8 343 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 GCOM2Q9BZD3 368 aaPredicted RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 UBE2OQ9C0C9 1292 aaKnown RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 QPCTLQ9NXS2 382 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ATXN10Q9UBB4 475 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 ADAMTS5Q9UNA0 930 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 POMPQ9Y244 141 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 DNAJC16Q9Y2G8 782 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 MAD1L1Q9Y6D9 718 aa8.75□□□□□ -1.01
VPS50-208ENST00000458707 PDCD11Q14690 1871 aaKnown RBP8.75□□□□□ -1.01
VPS50-208ENST00000458707 H3BNX3 289 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 DPYSL4O14531 572 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 APOL1O14791 398 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 DENRO43583 198 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 PLIN3O60664 434 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 GCATO75600 419 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TOMM70O94826 608 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 MICAL2O94851 1124 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TNNC2P02585 160 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 HMGCRP04035 888 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 SERPINE1P05121 402 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ITGAXP20702 1163 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 GRK2P25098 689 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PEX2P28328 305 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 IDH3AP50213 366 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ERFP50548 548 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CHN2P52757 468 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 MTTPP55157 894 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PHEXP78562 749 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TFAMQ00059 246 aaKnown RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 NIPAL4Q0D2K0 466 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 DLG1Q12959 904 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 PCLAFQ15004 111 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 INSCQ1MX18 579 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 BOLA3Q53S33 107 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 FAM102AQ5T9C2 384 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 OGFRL1Q5TC84 451 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 SH3PXD2AQ5TCZ1 1133 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 LPCAT4Q643R3 524 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 C1orf228Q6PIY5 440 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 DENND5BQ6ZUT9 1274 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 RTKN2Q8IZC4 609 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 MARVELD2Q8N4S9 558 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.74□□□□□ -1.01
VPS50-208ENST00000458707 SLC26A7Q8TE54 656 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CMTM5Q96DZ9 223 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 ANKRD36BP1Q96IX9 119 aa8.74□□□□□ -1.01
VPS50-208ENST00000458707 CORO1BQ9BR76 489 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms