RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 MUC3BQ9H195 1237 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ADNPQ9H2P0 1102 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 FBRSQ9HAH7 460 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 EHD2Q9NZN4 543 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CCDC39Q9UFE4 941 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ADAMTS1Q9UHI8 967 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TUBD1Q9UJT1 453 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TMA7Q9Y2S6 64 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PCDHGA8Q9Y5G5 932 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 AK5Q9Y6K8 562 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 HELZP42694 1942 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 KLF18A0A0U1RQI7 1052 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 A0A1B0GVT2 93 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ANTXRLA6NF34 631 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MEI4A8MW99 385 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CDRT15L2A8MXV6 281 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 H0Y8X5 98 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CACNG3O60359 315 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TSPAN3O60637 253 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TULP3O75386 442 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TOM1L1O75674 476 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 BAG4O95429 457 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 OAS1P00973 400 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PIGRP01833 764 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 FAM163BP0C2L3 166 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ADH5P11766 374 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CKMT2P17540 419 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PTMSP20962 102 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 GLDCP23378 1020 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CD27P26842 260 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 HSPA4P34932 840 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SLC6A11P48066 632 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TRAPPC10P48553 1259 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ST13P50502 369 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TUBP50607 506 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NLRP5P59047 1200 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ZXDBP98169 803 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 HNRNPUQ00839 825 aaKnown RBP eCLIP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 AKAP17AQ02040 695 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ZBTB16Q05516 673 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CCDC173Q0VFZ6 552 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ORC2Q13416 577 aaPredicted RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 KRT32Q14532 448 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SHBQ15464 509 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TAF12Q16514 161 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ZNF568Q3ZCX4 644 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 DCAF12L1Q5VU92 463 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SNX30Q5VWJ9 437 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PAOXQ6QHF9 649 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 VSTM1Q6UX27 236 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 DSTYKQ6XUX3 929 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ZNF662Q6ZS27 426 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LIMS2Q7Z4I7 341 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LRRTM3Q86VH5 581 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 C12orf40Q86WS4 652 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 RAB11FIP4Q86YS3 637 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TPH2Q8IWU9 490 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 PLD6Q8N2A8 252 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TMEM130Q8N3G9 435 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 RBBP8NLQ8NC74 664 aaPredicted RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 LRRC15Q8TF66 581 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 OVCA2Q8WZ82 227 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TOE1Q96GM8 510 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CNDP2Q96KP4 475 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 IFT74Q96LB3 600 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 MMS19Q96T76 1030 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SEPT5Q99719 369 aaPredicted RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ACBD6Q9BR61 282 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TIPINQ9BVW5 301 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 POLR1BQ9H9Y6 1135 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 USP29Q9HBJ7 922 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CBX8Q9HC52 389 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 METTL14Q9HCE5 456 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CYP4F12Q9HCS2 524 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 DEC1Q9P2X7 70 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 TUBGCP4Q9UGJ1 667 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CYP8B1Q9UNU6 501 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 CLCA2Q9UQC9 943 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 ANKRD6Q9Y2G4 727 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SLC27A6Q9Y2P4 619 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SNX11Q9Y5W9 270 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 NBEAQ8NFP9 2946 aa2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SMG1Q96Q15 3661 aaKnown RBP2.26□□□□□ -2.05
NEDD1-204ENST00000457368 SPTAN1Q13813 2472 aaKnown RBP2.25□□□□□ -2.05
NEDD1-204ENST00000457368 UBR5O95071 2799 aaPredicted RBP2.25□□□□□ -2.05
NEDD1-204ENST00000457368 ASPMQ8IZT6 3477 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 K7ERI5 159 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 FAM189A1O60320 539 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 USO1O60763 962 aaKnown RBP2.25□□□□□ -2.05
NEDD1-204ENST00000457368 SOAT2O75908 522 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 DEXIO95424 95 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 MT-CO3P00414 261 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 CKMP06732 381 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 GP1BAP07359 652 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 LIG1P18858 919 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 HDCP19113 662 aa2.25□□□□□ -2.05
NEDD1-204ENST00000457368 POU3F2P20265 443 aaPredicted RBP2.25□□□□□ -2.05
NEDD1-204ENST00000457368 ACO1P21399 889 aaKnown RBP2.25□□□□□ -2.05
NEDD1-204ENST00000457368 EPHA8P29322 1005 aaPredicted RBP2.25□□□□□ -2.05
NEDD1-204ENST00000457368 HARS2P49590 506 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms