RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 PRICKLE1Q96MT3 831 aaPredicted RBP15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 MED15Q96RN5 788 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 CRACR2AQ9BSW2 395 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 ITM2CQ9NQX7 267 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 ST7Q9NRC1 585 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 XPO7Q9UIA9 1087 aaKnown RBP15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 GGA2Q9UJY4 613 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 STOML2Q9UJZ1 356 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 RALYQ9UKM9 306 aaKnown RBP15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 KIAA1257Q9ULG3 409 aa15.9■□□□□ 0.14
CROCCP4-201ENST00000457096 FAM170AA1A519 330 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 MEI4A8MW99 385 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 ARHGAP33O14559 1287 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PMM2O15305 246 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 IGLV3-27P01718 113 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 AFPP02771 609 aaKnown RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PABPC1P11940 636 aaKnown RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 CEACAM1P13688 526 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 CD59P13987 128 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 TBX4P57082 545 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 RPS24P62847 133 aaKnown RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 ARID5AQ03989 594 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PTPRNQ16849 979 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 ADGRF1Q5T601 910 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PIK3R6Q5UE93 754 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 SYPL2Q5VXT5 272 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 MBLAC2Q68D91 279 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 MMS22LQ6ZRQ5 1243 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PIP4P1Q86T03 277 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 ELOA2Q8IYF1 753 aaPredicted RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 CFAP52Q8N1V2 620 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 SCML4Q8N228 414 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 ZCCHC9Q8N567 271 aaKnown RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 CEP76Q8TAP6 659 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 DQX1Q8TE96 717 aaKnown RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 PRCCQ92733 491 aaPredicted RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 SLC2A11Q9BYW1 496 aa15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 NUCKS1Q9H1E3 243 aaKnown RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 MUC22E2RYF6 1773 aaPredicted RBP15.89■□□□□ 0.13
CROCCP4-201ENST00000457096 ASCC3Q8N3C0 2202 aaKnown RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 BICDL2A1A5D9 508 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 HYAL3O43820 417 aaPredicted RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 ACSL4O60488 711 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 LETM1O95202 739 aaPredicted RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 MOCS2O96007 188 aaPredicted RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 GPD2P43304 727 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 SIM1P81133 766 aaPredicted RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 BNC1Q01954 994 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 GRIK2Q13002 908 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 DCAF12L1Q5VU92 463 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 TAC4Q86UU9 113 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 IRGQQ8WZA9 623 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 FAM149B1Q96BN6 582 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 FCRL2Q96LA5 508 aaPredicted RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 SCNM1Q9BWG6 230 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 TMEM245Q9H330 911 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 IL21RQ9HBE5 538 aa15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 AJAP1Q9UKB5 411 aaPredicted RBP15.88■□□□□ 0.13
CROCCP4-201ENST00000457096 P4HA2O15460 535 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 SH3BP5O60239 455 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 OPHN1O60890 802 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 ACADMP11310 421 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 SLC9A1P19634 815 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 ACSL1P33121 698 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 HOXD12P35452 270 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 GCNT1Q02742 428 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 CETN1Q12798 172 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 CAMK2GQ13555 558 aaPredicted RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 EIF4HQ15056 248 aaKnown RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 TAF5Q15542 800 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 FSCBQ5H9T9 825 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 LAYNQ6UX15 382 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 KIAA0907Q7Z7F0 614 aaPredicted RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 METTL3Q86U44 580 aaKnown RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 CARNMT1Q8N4J0 409 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 HDDC3Q8N4P3 179 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 OR2T3Q8NH03 318 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 SNX19Q92543 992 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 LMLNQ96KR4 655 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 HSFY1Q96LI6 401 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 C6orf106Q9H6K1 298 aaPredicted RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 PRSS16Q9NQE7 514 aa15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 EIF2B4Q9UI10 523 aaKnown RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 INTS6Q9UL03 887 aaKnown RBP15.87■□□□□ 0.13
CROCCP4-201ENST00000457096 PI4KAP42356 2102 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 USP24Q9UPU5 2620 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 ASPMQ8IZT6 3477 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 BECN2A8MW95 431 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 E5RJQ4 531 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 PAPSS1O43252 624 aaPredicted RBP15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 THAP12O43422 761 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 PNMA6AP0CW24 399 aaPredicted RBP15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 PPP1R2P41236 205 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 DPP6P42658 865 aa15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 CTSOP43234 321 aaPredicted RBP15.86■□□□□ 0.13
CROCCP4-201ENST00000457096 MARSP56192 900 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms