RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 IGFN1Q86VF2 1251 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CARM1Q86X55 608 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 RHOT2Q8IXI1 618 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 C7orf31Q8N865 590 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC44A1Q8WWI5 657 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ISOC1Q96CN7 298 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 IQCDQ96DY2 449 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TTC25Q96NG3 672 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PYM1Q9BRP8 204 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SMOXQ9NWM0 555 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TMOD2Q9NZR1 351 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 UVRAGQ9P2Y5 699 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GABRQQ9UN88 632 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 CTDP1Q9Y5B0 961 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ARHGEF35A5YM69 484 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 FXYD1O00168 92 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 STRNO43815 780 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 LRCH4O75427 683 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TSPY3P0CV98 308 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TSPY8P0CW00 308 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 LMNB1P20700 586 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 COG7P83436 770 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CHI3L2Q15782 390 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CLEC16AQ2KHT3 1053 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PLA2G4EQ3MJ16 856 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 UBE2UQ5VVX9 321 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 BORAQ6PGQ7 559 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PACS1Q6VY07 963 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF781Q8N8C0 355 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM47BQ8NA70 645 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 SIGLEC10Q96LC7 697 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 UNC45AQ9H3U1 944 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CAAP1Q9H8G2 361 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CCPG1Q9ULG6 757 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 USTQ9Y2C2 406 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 FADS3Q9Y5Q0 445 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TULP1O00294 542 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 E2F6O75461 281 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PRSS23O95084 383 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TFE3P19532 575 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PRDX6P30041 224 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 MLH1P40692 756 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 HSD17B4P51659 736 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 YWHAGP61981 247 aaKnown RBP eCLIP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 NFX1Q12986 1120 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 STX3Q13277 289 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 UGCGQ16739 394 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF394Q53GI3 561 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PIGGQ5H8A4 983 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 MTX3Q5HYI7 312 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CHSY3Q70JA7 882 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 MON1BQ7L1V2 547 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 NET1Q7Z628 596 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 RETREG3Q86VR2 466 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CHPT1Q8WUD6 406 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 SNX19Q92543 992 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 NKD2Q969F2 451 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ABCA3Q99758 1704 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 EIF2AK1Q9BQI3 630 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF341Q9BYN7 854 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 POPDC2Q9HBU9 364 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PAIP2BQ9ULR5 123 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TCAF1Q9Y4C2 921 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PCDHA1Q9Y5I3 950 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 SF3B1O75533 1304 aaKnown RBP eCLIP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CLOCKO15516 846 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CHMP2AO43633 222 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TGDSO95455 350 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ABHD2P08910 425 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 GLULP15104 373 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ATF2P15336 505 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 OPRL1P41146 370 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 IREB2P48200 963 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 OTUD4Q01804 1114 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 RALGDSQ12967 914 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 LSM12Q3MHD2 195 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ODR4Q5SWX8 454 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ZFYVE27Q5T4F4 411 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 XAF1Q6GPH4 301 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ALLCQ8N6M5 410 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC43A3Q8NBI5 491 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 OR5B17Q8NGF7 314 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 OR2T34Q8NGX1 318 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ITCHQ96J02 903 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ZBTB45Q96K62 511 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PEBP4Q96S96 227 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CDRT15Q96T59 188 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 APOL6Q9BWW8 343 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CEP41Q9BYV8 373 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 PLSCR3Q9NRY6 295 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 COL20A1Q9P218 1284 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 BCAP29Q9UHQ4 241 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CAB39Q9Y376 341 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 A0A1B0GTL3 188 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ARHGAP42A6NI28 874 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC15A5A6NIM6 579 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 F5H423 210 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 P4HA2O15460 535 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CES1P23141 567 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms