RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CNGA2Q16280 664 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 ADGRF1Q5T601 910 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 PIK3R6Q5UE93 754 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 DCAF12L1Q5VU92 463 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 CHST9Q7L1S5 443 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 ELOA2Q8IYF1 753 aaPredicted RBP16.72■□□□□ 0.27
GPC1-206ENST00000455111 KDF1Q8NAX2 398 aaPredicted RBP16.72■□□□□ 0.27
GPC1-206ENST00000455111 SIPA1Q96FS4 1042 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 FCRL2Q96LA5 508 aaPredicted RBP16.72■□□□□ 0.27
GPC1-206ENST00000455111 CEP63Q96MT8 703 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 ACP6Q9NPH0 428 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 OLA1Q9NTK5 396 aaKnown RBP16.72■□□□□ 0.27
GPC1-206ENST00000455111 ABCB8Q9NUT2 735 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 HESX1Q9UBX0 185 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 TJP2Q9UDY2 1190 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 XPO7Q9UIA9 1087 aaKnown RBP16.72■□□□□ 0.27
GPC1-206ENST00000455111 ZMIZ1Q9ULJ6 1067 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 CNTN6Q9UQ52 1028 aa16.72■□□□□ 0.27
GPC1-206ENST00000455111 METTL12A8MUP2 240 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 M0QYV0 167 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 SH3BP5O60239 455 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 SMC2O95347 1197 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 TBXAS1P24557 533 aaPredicted RBP16.71■□□□□ 0.27
GPC1-206ENST00000455111 ACSL1P33121 698 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 GPD2P43304 727 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 PITX1P78337 314 aaPredicted RBP16.71■□□□□ 0.27
GPC1-206ENST00000455111 APBA1Q02410 837 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 KLHL10Q6JEL2 608 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 DENND1BQ6P3S1 775 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 RGL4Q8IZJ4 473 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 SIX6OS1Q8N1H7 587 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 PPM1KQ8N3J5 372 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 ZCCHC9Q8N567 271 aaKnown RBP16.71■□□□□ 0.27
GPC1-206ENST00000455111 NELFBQ8WX92 580 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 NT5C1BQ96P26 610 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
GPC1-206ENST00000455111 ORAI3Q9BRQ5 295 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 C6orf106Q9H6K1 298 aaPredicted RBP16.71■□□□□ 0.27
GPC1-206ENST00000455111 METTL14Q9HCE5 456 aaKnown RBP16.71■□□□□ 0.27
GPC1-206ENST00000455111 GGA2Q9UJY4 613 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 KIAA1257Q9ULG3 409 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 CTNND2Q9UQB3 1225 aa16.71■□□□□ 0.27
GPC1-206ENST00000455111 BIN1O00499 593 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 NPC1O15118 1278 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 OPHN1O60890 802 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 CBFA2T3O75081 653 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 NDUFS2O75306 463 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 LATS1O95835 1130 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 LTFP02788 710 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 CYBBP04839 570 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 STX17P56962 302 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 SIM1P81133 766 aaPredicted RBP16.7■□□□□ 0.26
GPC1-206ENST00000455111 STARD3Q14849 445 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 FSCBQ5H9T9 825 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 SYPL2Q5VXT5 272 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 MBLAC2Q68D91 279 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 EHBP1Q8NDI1 1231 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 OR2T3Q8NH03 318 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 DQX1Q8TE96 717 aaKnown RBP16.7■□□□□ 0.26
GPC1-206ENST00000455111 RNF139Q8WU17 664 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 IRGQQ8WZA9 623 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 PRCCQ92733 491 aaPredicted RBP16.7■□□□□ 0.26
GPC1-206ENST00000455111 TMA16Q96EY4 203 aaKnown RBP16.7■□□□□ 0.26
GPC1-206ENST00000455111 SLC39A13Q96H72 371 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 MIS12Q9H081 205 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 PRSS16Q9NQE7 514 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 NAALADL1Q9UQQ1 740 aa16.7■□□□□ 0.26
GPC1-206ENST00000455111 CHD6Q8TD26 2715 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 DMXL2Q8TDJ6 3036 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 C10orf142B7Z368 130 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 PSMA7O14818 248 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 ACSL4O60488 711 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 TBL1XO60907 577 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 PABPC1P11940 636 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 HARS2P49590 506 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 SLC8A3P57103 927 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 YWHAEP62258 255 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 RPS14P62263 151 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 RPS24P62847 133 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 KCNH2Q12809 1159 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 EIF4EBP2Q13542 120 aaPredicted RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 CCDC40Q4G0X9 1142 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 GJB7Q6PEY0 223 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 SERPINA13PQ6UXR4 307 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 MMS22LQ6ZRQ5 1243 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 FAM124AQ86V42 546 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 CHCHD4Q8N4Q1 142 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 CADM4Q8NFZ8 388 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 UCMAQ8WVF2 138 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 FOXJ1Q92949 421 aa16.69■□□□□ 0.26
GPC1-206ENST00000455111 NUCKS1Q9H1E3 243 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 EIF2B4Q9UI10 523 aaKnown RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 AJAP1Q9UKB5 411 aaPredicted RBP16.69■□□□□ 0.26
GPC1-206ENST00000455111 IGF2RP11717 2491 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms