RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DNAJB2P25686 324 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PCSK1P29120 753 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 YWHAGP61981 247 aaKnown RBP eCLIP5.15□□□□□ -1.58
RIF1-207ENST00000454583 TNNC1P63316 161 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 MESP2Q0VG99 397 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 WASHC5Q12768 1159 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PIGHQ14442 188 aaPredicted RBP5.15□□□□□ -1.58
RIF1-207ENST00000454583 KIAA1841Q6NSI8 718 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 C6orf89Q6UWU4 347 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 BBS12Q6ZW61 710 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 C14orf80Q86SX3 495 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 RASGRP3Q8IV61 690 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 VPS52Q8N1B4 723 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 UMODL1-AS1Q8N2C9 162 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PYROXD2Q8N2H3 581 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 ATAD1Q8NBU5 361 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 TMEM35BQ8NCS4 154 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 RXFP2Q8WXD0 754 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 EXOC4Q96A65 974 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 FUBP1Q96AE4 644 aaKnown RBP5.15□□□□□ -1.58
RIF1-207ENST00000454583 CNPY3Q9BT09 278 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PLA2G2FQ9BZM2 168 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 PRDM16Q9HAZ2 1276 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 SCUBE2Q9NQ36 999 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 CNOT8Q9UFF9 292 aaKnown RBP5.15□□□□□ -1.58
RIF1-207ENST00000454583 ARHGAP26Q9UNA1 814 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 CCL26Q9Y258 94 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 ASB3Q9Y575 518 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 SLC4A7Q9Y6M7 1214 aa5.15□□□□□ -1.58
RIF1-207ENST00000454583 KIAA0100Q14667 2235 aaKnown RBP5.15□□□□□ -1.58
RIF1-207ENST00000454583 TSPAN11A1L157 253 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 CCDC188H7C350 402 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 M0QYV0 167 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 FZD6O60353 706 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 SUN1O94901 812 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 GRIN2CQ14957 1233 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 DDR2Q16832 855 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 TSR1Q2NL82 804 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 ZC3H12AQ5D1E8 599 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 TCERG1LQ5VWI1 586 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 ZNF280DQ6N043 979 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 FIBCD1Q8N539 461 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 EMC1Q8N766 993 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 WFDC5Q8TCV5 224 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 IGSF8Q969P0 613 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 C18orf8Q96DM3 657 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 TCEAL4Q96EI5 215 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 MCEEQ96PE7 176 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 SNRNP25Q9BV90 132 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 CCSER2Q9H7U1 834 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 TMBIM4Q9HC24 238 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 NGRNQ9NPE2 291 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 HPS4Q9NQG7 708 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 NPDC1Q9NQX5 325 aaPredicted RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 HCFC1R1Q9NWW0 138 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 GMIPQ9P107 970 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 CLEC4EQ9ULY5 219 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 PPIL1Q9Y3C6 166 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 DCHS1Q96JQ0 3298 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 DOCK9Q9BZ29 2069 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 LIASO43766 372 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 MAFKO60675 156 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 USP17L7P0C7H9 530 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 P4HA1P13674 534 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 GPD1P21695 349 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 OR1G1P47890 313 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 TKTL1P51854 596 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 GDF10P55107 478 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 PTK6Q13882 451 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 KCNJ11Q14654 390 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 NOMO1Q15155 1222 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 RASA2Q15283 850 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 PTPRNQ16849 979 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 TUSC1Q2TAM9 212 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 ZNF394Q53GI3 561 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 TAF3Q5VWG9 929 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 DENND5AQ6IQ26 1287 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 MON1AQ86VX9 555 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 GPIHBP1Q8IV16 184 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 HOMEZQ8IX15 550 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 GSPT2Q8IYD1 628 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 DEFB106AQ8N104 65 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 UBXN4Q92575 508 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 USP13Q92995 863 aaPredicted RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 CCDC43Q96MW1 224 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 IL12RB2Q99665 862 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 C11orf70Q9BRQ4 267 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 PRKD2Q9BZL6 878 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 MED4Q9NPJ6 270 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.15□□□□□ -1.593e-13■■■■■ 232.3
RIF1-207ENST00000454583 RRN3Q9NYV6 651 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 DRG1Q9Y295 367 aaKnown RBP5.15□□□□□ -1.59
RIF1-207ENST00000454583 PCDHB5Q9Y5E4 795 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 SCINQ9Y6U3 715 aa5.15□□□□□ -1.59
RIF1-207ENST00000454583 BCLAF3A2AJT9 711 aaKnown RBP5.14□□□□□ -1.59
RIF1-207ENST00000454583 MYO1FO00160 1098 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 NRDCO43847 1150 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 FAM200BP0CF97 657 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 CXCR5P32302 372 aa5.14□□□□□ -1.59
RIF1-207ENST00000454583 YWHAZP63104 245 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms