RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SYNCQ9H7C4 482 aa11.1□□□□□ -0.63
DDX39A-203ENST00000454233 ABCB8Q9NUT2 735 aa11.1□□□□□ -0.63
DDX39A-203ENST00000454233 SLC12A6Q9UHW9 1150 aa11.1□□□□□ -0.63
DDX39A-203ENST00000454233 MBD1Q9UIS9 605 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-203ENST00000454233 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
DDX39A-203ENST00000454233 PLA2G4CQ9UP65 541 aa11.1□□□□□ -0.63
DDX39A-203ENST00000454233 NDUFS2O75306 463 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 TRUB2O95900 331 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 ATP5BP06576 529 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 GLI1P08151 1106 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 PABPC1P11940 636 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 HLA-FP30511 346 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 SLC6A4P31645 630 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 CLCN1P35523 988 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 CDK17Q00537 523 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 ENPP2Q13822 863 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 DRAP1Q14919 205 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FUT11Q495W5 492 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FNDC3BQ53EP0 1204 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 DCAF6Q58WW2 860 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FAM133BQ5BKY9 247 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 LYSMD4Q5XG99 296 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 RNF43Q68DV7 783 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 OR6B2Q6IFH4 312 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 TCEAL6Q6IPX3 200 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 C11orf57Q6ZUT1 292 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 SLC47A2Q86VL8 602 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 MFN1Q8IWA4 741 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FAM71AQ8IYT1 594 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 AHI1Q8N157 1196 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FRMD1Q8N878 549 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.09□□□□□ -0.634e-10■■■■□ 21.2
DDX39A-203ENST00000454233 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 C1orf131Q8NDD1 294 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 SORCS1Q8WY21 1168 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 TCEAL3Q969E4 200 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 SLC39A13Q96H72 371 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 MRGPRX1Q96LB2 322 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 CPXM1Q96SM3 734 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 EDEM2Q9BV94 578 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FAM204AQ9H8W3 233 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 PRDM16Q9HAZ2 1276 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 CD248Q9HCU0 757 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 ASNSD1Q9NWL6 643 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 TAB2Q9NYJ8 693 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 STIM2Q9P246 746 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 CYP8B1Q9UNU6 501 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 FHOD1Q9Y613 1164 aa11.09□□□□□ -0.63
DDX39A-203ENST00000454233 NUP205Q92621 2012 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 IGHV1OR15-9A0A0B4J2B8 117 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 MED19A0JLT2 244 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 HSF2BPO75031 334 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 MBD3O95983 291 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 EPHX1P07099 455 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 PNMA6AP0CW24 399 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 SLC2A3P11169 496 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 UCHL3P15374 230 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 POLR2EP19388 210 aaKnown RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 PTGER3P43115 390 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 SGSHP51688 502 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 KCNMA1Q12791 1236 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 CDH18Q13634 790 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 ZC3H12AQ5D1E8 599 aaKnown RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 MS4A13Q5J8X5 152 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 STPG1Q5TH74 334 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 TMEM215Q68D42 235 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 MBLAC2Q68D91 279 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 NADSYN1Q6IA69 706 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 RBM43Q6ZSC3 357 aaKnown RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 METTL3Q86U44 580 aaKnown RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 CHSY1Q86X52 802 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 SYT12Q8IV01 421 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 DEFB106AQ8N104 65 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 WDTC1Q8N5D0 677 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 TMEM35BQ8NCS4 154 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 ANKRD20A12PQ8NF67 263 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 PRCCQ92733 491 aaPredicted RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 RNF34Q969K3 372 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 SIPA1Q96FS4 1042 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 BTN2A3PQ96KV6 586 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 NUSAP1Q9BXS6 441 aaKnown RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 NUCKS1Q9H1E3 243 aaKnown RBP11.08□□□□□ -0.64
DDX39A-203ENST00000454233 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 VPS16Q9H269 839 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 RXFP3Q9NSD7 469 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 ANO10Q9NW15 660 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.08□□□□□ -0.647e-6■□□□□ 10.1
DDX39A-203ENST00000454233 DDIT4Q9NX09 232 aa11.08□□□□□ -0.64
DDX39A-203ENST00000454233 CACNA1AO00555 2505 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 DMXL1Q9Y485 3027 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 SYNJ2BP-COX16A0A087WUM0 186 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms