RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 FARP1Q9Y4F1 1045 aaPredicted RBP22.05■■□□□ 1.12
CTU2-202ENST00000453996 SNX10Q9Y5X0 201 aa22.05■■□□□ 1.12
CTU2-202ENST00000453996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 H0YGN5 161 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 LRIG2O94898 1065 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 NRLP54845 237 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 PSRC1Q6PGN9 363 aaPredicted RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 HOOK3Q86VS8 718 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 TFB1MQ8WVM0 346 aaKnown RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 ZBED2Q9BTP6 218 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 SEMA4AQ9H3S1 761 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 MAGED2Q9UNF1 606 aaPredicted RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 RAD54BQ9Y620 910 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 NFS1Q9Y697 457 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 PAGE1O75459 146 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 SEC24AO95486 1093 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 SLC2A3P11169 496 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 EFEMP1Q12805 493 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 PDK1Q15118 436 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 RASIP1Q5U651 963 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 HEATR6Q6AI08 1181 aaKnown RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 CCDC33Q8N5R6 958 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 CPT1BQ92523 772 aa22.04■■□□□ 1.12
CTU2-202ENST00000453996 PRCCQ92733 491 aaPredicted RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 CDC42EP4Q9H3Q1 356 aaKnown RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 MRPL17Q9NRX2 175 aaKnown RBP22.04■■□□□ 1.12
CTU2-202ENST00000453996 KCNU1A8MYU2 1149 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 SMAPO00193 183 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 PPP1R12AO14974 1030 aaPredicted RBP22.03■■□□□ 1.12
CTU2-202ENST00000453996 RNF40O75150 1001 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 NUDT17P0C025 328 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 ZDHHC11BP0C7U3 371 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 DNAJB2P25686 324 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 EPHB2P29323 1055 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 HTR7P34969 479 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 TBX4P57082 545 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 BASP1P80723 227 aaKnown RBP22.03■■□□□ 1.12
CTU2-202ENST00000453996 RAB33AQ14088 237 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 C4orf22Q6V702 233 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 C7orf61Q8IZ16 206 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 SLC39A13Q96H72 371 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 PWWP2AQ96N64 755 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 UBE2OQ9C0C9 1292 aaKnown RBP22.03■■□□□ 1.12
CTU2-202ENST00000453996 SIK2Q9H0K1 926 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 CYP4F11Q9HBI6 524 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 PRDM10Q9NQV6 1147 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 DNAJC17Q9NVM6 304 aaKnown RBP22.03■■□□□ 1.12
CTU2-202ENST00000453996 INSL6Q9Y581 213 aa22.03■■□□□ 1.12
CTU2-202ENST00000453996 GOLGA8KD6RF30 607 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 RIPK2O43353 540 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 FGF18O76093 207 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 EIF3BP55884 814 aaKnown RBP22.02■■□□□ 1.12
CTU2-202ENST00000453996 CREMQ03060 361 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 C10orf120Q5SQS8 335 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 TMEM240Q5SV17 173 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 CEP85LQ5SZL2 805 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 GPR65Q8IYL9 337 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 NAT8LQ8N9F0 302 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 OR2W6PQ8NHA6 318 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 LRRN4Q8WUT4 740 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 AUTS2Q8WXX7 1259 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 FCRL2Q96LA5 508 aaPredicted RBP22.02■■□□□ 1.12
CTU2-202ENST00000453996 RBM15Q96T37 977 aaKnown RBP eCLIP22.02■■□□□ 1.12
CTU2-202ENST00000453996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.02■■□□□ 1.12
CTU2-202ENST00000453996 CXXC1Q9P0U4 656 aaPredicted RBP22.02■■□□□ 1.12
CTU2-202ENST00000453996 YIPF1Q9Y548 306 aa22.02■■□□□ 1.12
CTU2-202ENST00000453996 MOCS2O96007 188 aaPredicted RBP22.02■■□□□ 1.11
CTU2-202ENST00000453996 SERPINB6P35237 376 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 ZNF844Q08AG5 666 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 IFFO1Q0D2I5 559 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 PRKD1Q15139 912 aaPredicted RBP22.02■■□□□ 1.11
CTU2-202ENST00000453996 RELL1Q8IUW5 271 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 TAB3Q8N5C8 712 aaPredicted RBP22.02■■□□□ 1.11
CTU2-202ENST00000453996 PDZD8Q8NEN9 1154 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 HTR3CQ8WXA8 447 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 OVCA2Q8WZ82 227 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 FERMT1Q9BQL6 677 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 MARCH2Q9P0N8 246 aa22.02■■□□□ 1.11
CTU2-202ENST00000453996 PLXNA4Q9HCM2 1894 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 GOLGA6L10A6NI86 522 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 POLR3GO15318 223 aaPredicted RBP22.01■■□□□ 1.11
CTU2-202ENST00000453996 GCATO75600 419 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 ZNF189O75820 626 aaPredicted RBP22.01■■□□□ 1.11
CTU2-202ENST00000453996 APOEP02649 317 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 CSH1P0DML2 217 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 CSH2P0DML3 217 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 SRGAP2BP0DMP2 458 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 VAV1P15498 845 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 ALDH1A3P47895 512 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 SLC29A2Q14542 456 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 TRIP4Q15650 581 aaPredicted RBP22.01■■□□□ 1.11
CTU2-202ENST00000453996 ANKRD22Q5VYY1 191 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 CLP1Q92989 425 aaKnown RBP22.01■■□□□ 1.11
CTU2-202ENST00000453996 CDK5RAP1Q96SZ6 601 aaKnown RBP22.01■■□□□ 1.11
CTU2-202ENST00000453996 LGMNQ99538 433 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 FNIP2Q9P278 1114 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 NEU3Q9UQ49 428 aa22.01■■□□□ 1.11
CTU2-202ENST00000453996 C5orf60A6NFR6 353 aa22■■□□□ 1.11
CTU2-202ENST00000453996 NCAM2O15394 837 aa22■■□□□ 1.11
CTU2-202ENST00000453996 TLR5O60602 858 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms