RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 NUP58Q9BVL2 599 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 GOLPH3LQ9H4A5 285 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 C6orf106Q9H6K1 298 aaPredicted RBP9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 TM7SF3Q9NS93 570 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 RAB20Q9NX57 234 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 STRIP2Q9ULQ0 834 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZDHHC9Q9Y397 364 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 GPSM3Q9Y4H4 160 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 KALRNO60229 2985 aa9.23□□□□□ -0.93
DEPDC1B-202ENST00000453022 ACACAQ13085 2346 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 MYLKQ15746 1914 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 YJEFN3A6XGL0 299 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 E7ENQ6 273 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 XPO1O14980 1071 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 MSI1O43347 362 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 DKK1O94907 266 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 ACADMP11310 421 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 RPL13P26373 211 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 CSNK1EP49674 416 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 BCAT1P54687 386 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 ADIGQ0VDE8 80 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 PTPRNQ16849 979 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 EDRF1Q3B7T1 1238 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 LAYNQ6UX15 382 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 DBX2Q6ZNG2 339 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 KRBA2Q6ZNG9 492 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 KIAA0907Q7Z7F0 614 aaPredicted RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 ADIPOR2Q86V24 386 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 TTC39CQ8N584 583 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 MDM1Q8TC05 714 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 WFDC5Q8TCV5 224 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 SETD7Q8WTS6 366 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 EDEM1Q92611 657 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 SPATA32Q96LK8 384 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 DNAI2Q9GZS0 605 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 PCED1AQ9H1Q7 454 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 LHX5Q9H2C1 402 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 SFMBT1Q9UHJ3 866 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 STOML2Q9UJZ1 356 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 TSPAN16Q9UKR8 245 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 APOBEC2Q9Y235 224 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 BTBD3Q9Y2F9 522 aa9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 HBS1LQ9Y450 684 aaKnown RBP9.22□□□□□ -0.93
DEPDC1B-202ENST00000453022 FLRT2O43155 660 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 TIMM44O43615 452 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 ATXN1LP0C7T5 689 aaKnown RBP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 AFF3P51826 1226 aaKnown RBP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 FNDC3BQ53EP0 1204 aaKnown RBP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 BSPRYQ5W0U4 402 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 C19orf48Q6RUI8 117 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 IL27RAQ6UWB1 636 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 CHST9Q7L1S5 443 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 UBR7Q8N806 425 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 SNX19Q92543 992 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 CCDC47Q96A33 483 aaKnown RBP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 ORAI3Q9BRQ5 295 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 TM9SF3Q9HD45 589 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 OLA1Q9NTK5 396 aaKnown RBP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 ABCB8Q9NUT2 735 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 KIAA1522Q9P206 1035 aaPredicted RBP9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 GGA2Q9UJY4 613 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 COQ4Q9Y3A0 265 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 PCDHGB2Q9Y5G2 931 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 SNX11Q9Y5W9 270 aa9.21□□□□□ -0.93
DEPDC1B-202ENST00000453022 GOLGA4Q13439 2230 aaKnown RBP9.21□□□□□ -0.94
DEPDC1B-202ENST00000453022 DOCK9Q9BZ29 2069 aa9.21□□□□□ -0.94
DEPDC1B-202ENST00000453022 O00370 1275 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 LATS1O95835 1130 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 IGLV3-27P01718 113 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 EPB41P11171 864 aaKnown RBP9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 PABPC1P11940 636 aaKnown RBP9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 SLC6A4P31645 630 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 HARS2P49590 506 aaKnown RBP9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 SLC8A3P57103 927 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 RPS14P62263 151 aaKnown RBP9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 ARID5AQ03989 594 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 BST2Q10589 180 aaKnown RBP9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 CUL2Q13617 745 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 ACAP1Q15027 740 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 E2F5Q15329 346 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 KIF19Q2TAC6 998 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 PKDCCQ504Y2 493 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 KCNT1Q5JUK3 1230 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 ADGRF1Q5T601 910 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 MSANTD2Q6P1R3 559 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 TMPRSS7Q7RTY8 843 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 MARCH9Q86YJ5 346 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 AHI1Q8N157 1196 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 UBA3Q8TBC4 463 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 WFIKKN2Q8TEU8 576 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 BIRC7Q96CA5 298 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 MYO19Q96H55 970 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 CCDC86Q9H6F5 360 aaKnown RBP9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 LRRC4Q9HBW1 653 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 PRSS16Q9NQE7 514 aa9.2□□□□□ -0.94
DEPDC1B-202ENST00000453022 ATMQ13315 3056 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms