RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MED15Q96RN5 788 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 TOR3AQ9H497 397 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 EPS8L2Q9H6S3 715 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 GPR35Q9HC97 309 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 GALNT9Q9HCQ5 603 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 BLOC1S4Q9NUP1 217 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 RLIMQ9NVW2 624 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 VSX1Q9NZR4 365 aaPredicted RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 C11orf21Q9P2W6 132 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 HERC5Q9UII4 1024 aaKnown RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 EPN1Q9Y6I3 576 aaPredicted RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 KIF7Q2M1P5 1343 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ADCY9O60503 1353 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ADAMTS7Q9UKP4 1686 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 TIAM2Q8IVF5 1701 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 E9PLN8 166 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 KCNQ3O43525 872 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 DNPH1O43598 174 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 TIMM44O43615 452 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 VPS4BO75351 444 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 ACTL6BO94805 426 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 ITGA2BP08514 1039 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 HKR1P10072 659 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 PIM1P11309 404 aaPredicted RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 IDEP14735 1019 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 DPEP1P16444 411 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 XBP1P17861 261 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 ATICP31939 592 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 ADD2P35612 726 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 AVPR1BP47901 424 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 SEC24CP53992 1094 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 FOXI1Q12951 378 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 KCNAB1Q14722 419 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 DLGAP5Q15398 846 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 ADCK5Q3MIX3 580 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 GPATCH4Q5T3I0 446 aaKnown RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 PLAG1Q6DJT9 500 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 RRAGAQ7L523 313 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 PDSS2Q86YH6 399 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 GATAD2AQ86YP4 633 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 HERC6Q8IVU3 1022 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 C16orf71Q8IYS4 520 aaPredicted RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 AOPEPQ8N6M6 819 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 Q8NA96 180 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 SCAMP5Q8TAC9 235 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 SPPL3Q8TCT6 385 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 CSGALNACT1Q8TDX6 532 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 HDAC2Q92769 488 aaKnown RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 CAVIN3Q969G5 261 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 CFAP53Q96M91 514 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 Q96MF0 132 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 KLHL32Q96NJ5 620 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 VKORC1Q9BQB6 163 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 SPATA5L1Q9BVQ7 753 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 IMPG2Q9BZV3 1241 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 UNKLQ9H9P5 680 aaKnown RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 SAYSD1Q9NPB0 183 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 LPAR3Q9UBY5 353 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 TESQ9UGI8 421 aaKnown RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 CDYLQ9Y232 598 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 PAXBP1Q9Y5B6 917 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 USP42Q9H9J4 1324 aaKnown RBP4.89□□□□□ -1.63
LINC00393-202ENST00000452852 SCN7AQ01118 1682 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 NRXN2Q9P2S2 1712 aa4.89□□□□□ -1.63
LINC00393-202ENST00000452852 KCPQ6ZWJ8 1503 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 A6NCN8 305 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 MYADML2A6NDP7 307 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 RNMTO43148 476 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 HOXC11O43248 304 aaPredicted RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 SOAT2O75908 522 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 FAM155BO75949 473 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 STARD3NLO95772 234 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 NPPBP16860 134 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 TPH1P17752 444 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 EGR1P18146 543 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 RXRAP19793 462 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 CST5P28325 142 aaPredicted RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 CPT1AP50416 773 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 INHBEP58166 350 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 BLOC1S1P78537 153 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 TEFQ10587 303 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 BOP1Q14137 746 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 ARHGEF7Q14155 803 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 NPY5RQ15761 445 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 SMN1Q16637 294 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 GEN1Q17RS7 908 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 MTHFSDQ2M296 383 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 PLA1AQ53H76 456 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 ARL6IP4Q66PJ3 421 aaKnown RBP4.88□□□□□ -1.63
LINC00393-202ENST00000452852 FCRL6Q6DN72 434 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 MZT2BQ6NZ67 158 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 CCDC28AQ8IWP9 274 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 DNAJC10Q8IXB1 793 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 FAM9BQ8IZU0 186 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 SLC44A3Q8N4M1 653 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 PCYOX1LQ8NBM8 494 aa4.88□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF384Q8TF68 577 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms