RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ZSWIM1Q9BR11 485 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 DHX36Q9H2U1 1008 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 VCXQ9H320 206 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 MMADHCQ9H3L0 296 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CDC42EP4Q9H3Q1 356 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 DENND2DQ9H6A0 471 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 RIOX1Q9H6W3 641 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 C17orf75Q9HAS0 396 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 C6orf50Q9HD87 102 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 NMRK1Q9NWW6 199 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 IRAK4Q9NWZ3 460 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PDP2Q9P2J9 529 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ATXN10Q9UBB4 475 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 MTRF1LQ9UGC7 380 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARMCX3Q9UH62 379 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRMT112Q9UI30 125 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ING1Q9UK53 422 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 HDAC9Q9UKV0 1011 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMCO1Q9UM00 188 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 COG5Q9UP83 839 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZFR2Q9UPR6 939 aaKnown RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 STK38LQ9Y2H1 464 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 PTPN22Q9Y2R2 807 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 TELO2Q9Y4R8 837 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 CD2APQ9Y5K6 639 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 GMEB1Q9Y692 573 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ITGB4P16144 1822 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 SNED1Q8TER0 1413 aa4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 COL5A2P05997 1499 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P22-202ENST00000451823 ROBO1Q9Y6N7 1651 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARFGEF1Q9Y6D6 1849 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SMCO2A6NFE2 343 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 BTBD19C9JJ37 291 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 NPIPB8E9PQR5 432 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAPK13O15264 365 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 PRODHO43272 600 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC37A4O43826 429 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNAJC6O75061 913 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DCTN3O75935 186 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 GH1P01241 217 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 IL1BP01584 269 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 BRAFP15056 766 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 FGFR4P22455 802 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 GCAP28676 217 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ADSSP30520 456 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CSF2RBP32927 897 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 PCK1P35558 622 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 COPB2P35606 906 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 STAT1P42224 750 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC12A3P55017 1021 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CHRNDQ07001 517 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 AP1B1Q10567 949 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 STRN3Q13033 797 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 PTK6Q13882 451 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 HNRNPDQ14103 355 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 MYBPC3Q14896 1274 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 PRKD1Q15139 912 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC15A2Q16348 729 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CALCRLQ16602 461 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 LONRF1Q17RB8 773 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 EXOC3L4Q17RC7 722 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KCTD19Q17RG1 926 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC10A6Q3KNW5 377 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 NRN1LQ496H8 165 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KHDC1Q4VXA5 237 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 RNF220Q5VTB9 566 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 AGBL4Q5VU57 503 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SUSD4Q5VX71 490 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KRT79Q5XKE5 535 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 LBX2Q6XYB7 198 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 MIGA2Q7L4E1 593 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAEAQ7L5Y9 396 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ADGRG6Q86SQ4 1221 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 VPS36Q86VN1 386 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 LONP2Q86WA8 852 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 MCF2L2Q86YR7 1114 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC13A5Q86YT5 568 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 RHOT2Q8IXI1 618 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC65Q8IXS2 484 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF276Q8N554 614 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC17A8Q8NDX2 589 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 U2AF1L4Q8WU68 220 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DCAF4Q8WV16 495 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 PSPC1Q8WXF1 523 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 IRGQQ8WZA9 623 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 PTCD3Q96EY7 689 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 TGS1Q96RS0 853 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ADOQ96SZ5 270 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM47Q9BQJ4 181 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DDX23Q9BUQ8 820 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CADM1Q9BY67 442 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 STK33Q9BYT3 514 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CRNKL1Q9BZJ0 848 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM4Q9C037 500 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIAA1683Q9H0B3 1180 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KANSL2Q9H9L4 492 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 UBN1Q9NPG3 1134 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 CHCHD3Q9NX63 227 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms