RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 DENND5AQ6IQ26 1287 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 PIGWQ7Z7B1 504 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ZC3H18Q86VM9 953 aaKnown RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 PARP9Q8IXQ6 854 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 UNC5BQ8IZJ1 945 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 UHMK1Q8TAS1 419 aaKnown RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 ADAMTS19Q8TE59 1207 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ZNF333Q96JL9 665 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ROPN1BQ9BZX4 212 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 SNX25Q9H3E2 840 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ROPN1Q9HAT0 212 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 KANSL3Q9P2N6 904 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 RASAL2Q9UJF2 1139 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 SOAT2O75908 522 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 MMP2P08253 660 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 SULT1E1P49888 294 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 C5orf22Q49AR2 442 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 FAM47CQ5HY64 1035 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 NOMO2Q5JPE7 1267 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 HP1BP3Q5SSJ5 553 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 KCNT2Q6UVM3 1135 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 APBB1IPQ7Z5R6 666 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 C14orf80Q86SX3 495 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ZNF567Q8N184 647 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 FAM76AQ8TAV0 307 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 CCDC110Q8TBZ0 833 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 SCLYQ96I15 445 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ATP13A1Q9HD20 1204 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 B3GAT3O94766 335 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ASMTLO95671 621 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 LTFP02788 710 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ODC1P11926 461 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 PPIDQ08752 370 aaKnown RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 DCAF6Q58WW2 860 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 EFHC1Q5JVL4 640 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 VARS2Q5ST30 1063 aaKnown RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 SYCP2LQ5T4T6 812 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 SLC39A5Q6ZMH5 540 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 CDHR3Q6ZTQ4 885 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 TMCO2Q7Z6W1 182 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 WBP2Q969T9 261 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ACSS3Q9H6R3 686 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 NGRNQ9NPE2 291 aaKnown RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 SLC17A6Q9P2U8 582 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ASIC3Q9UHC3 531 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 TCRBV9S1A1TA0A576 114 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 TRIM43BA6NCK2 446 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 FKTNO75072 461 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 AGTP01019 485 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 TPSB2P20231 275 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ADCY8P40145 1251 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 SLCO1A2P46721 670 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 PPP1R7Q15435 360 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 TPSAB1Q15661 275 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 SNX30Q5VWJ9 437 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 BSPRYQ5W0U4 402 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 MCUQ8NE86 351 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 EDEM1Q92611 657 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 TRIM43Q96BQ3 446 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 SERAC1Q96JX3 654 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 CCDC114Q96M63 670 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 CALN1Q9BXU9 219 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 CAPS2Q9BXY5 557 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 EPN3Q9H201 632 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
USP46-202ENST00000451218 SCML2Q9UQR0 700 aa6.81□□□□□ -1.32
USP46-202ENST00000451218 ATXN2Q99700 1313 aaKnown RBP6.8□□□□□ -1.32
USP46-202ENST00000451218 WASH4PA8MWX3 477 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 GOLGA8MH3BSY2 632 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 APOL1O14791 398 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 MSI1O43347 362 aaKnown RBP6.8□□□□□ -1.32
USP46-202ENST00000451218 OPA1O60313 960 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 MAFKO60675 156 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 LRIG2O94898 1065 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 GALTP07902 379 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 CHN1P15882 459 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 HMGA1P17096 107 aaKnown RBP6.8□□□□□ -1.32
USP46-202ENST00000451218 PTPN3P26045 913 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 ARNTP27540 789 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 ADRA1AP35348 466 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 MAGEA12P43365 314 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 NEK3P51956 506 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 SLC18A1P54219 525 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 AIF1P55008 147 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 SDHAF4Q5VUM1 108 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 TRMT10BQ6PF06 316 aaKnown RBP6.8□□□□□ -1.32
USP46-202ENST00000451218 RFX6Q8HWS3 928 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 C8orf48Q96LL4 319 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 FCRL3Q96P31 734 aaPredicted RBP6.8□□□□□ -1.32
USP46-202ENST00000451218 FOXP3Q9BZS1 431 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 STARD7Q9NQZ5 370 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 PLXNA2O75051 1894 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 LRRK1Q38SD2 2015 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 WDR27A2RRH5 827 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 MTMR11A4FU01 709 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 FAM159BA6NKW6 160 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 M0QYT0 321 aa6.8□□□□□ -1.32
USP46-202ENST00000451218 PRPF4O43172 522 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP46-202ENST00000451218 XPOTO43592 962 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms