RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DDI1Q8WTU0 396 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 DCAKDQ8WVC6 231 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ZDHHC15Q96MV8 337 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 CGRRF1Q99675 332 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 APBA2Q99767 749 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 PCDHAC1Q9H158 963 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ANGPT2O15123 496 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 TRIM13O60858 407 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ICAM1P05362 532 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 CKMT2P17540 419 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 MPSTP25325 297 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 GRIA3P42263 894 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 BFSP2Q13515 415 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 PLCL1Q15111 1095 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 PGM5Q15124 567 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 TBCCQ15814 346 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 BOLA3Q53S33 107 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 CDC26Q8NHZ8 85 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 SHKBP1Q8TBC3 707 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 TFB1MQ8WVM0 346 aaKnown RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 NCLNQ969V3 563 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 CNPY3Q9BT09 278 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 TMEM216Q9P0N5 145 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ADAMTS6Q9UKP5 1117 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ZNRF3Q9ULT6 936 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 TIPRLO75663 272 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 MUTP22033 750 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 HADHBP55084 474 aaKnown RBP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 CSHL1Q14406 222 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 POU6F1Q14863 301 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 ATF7IP2Q5U623 682 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 ZNF781Q8N8C0 355 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 OR52K1Q8NGK4 314 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 MYRFQ9Y2G1 1151 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 NR5A2O00482 541 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 GSTA4O15217 222 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 INPP4BO15327 924 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 GRK2P25098 689 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 SULT1E1P49888 294 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 C21orf59P57076 290 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 YWHAZP63104 245 aaKnown RBP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 KLF10Q13118 480 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 KRT72Q14CN4 511 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 FAM83EQ2M2I3 478 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 KLHDC10Q6PID8 442 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 CPB2Q96IY4 423 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 CELF6Q96J87 481 aaKnown RBP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 DGCR6LQ9BY27 220 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 DDX28Q9NUL7 540 aaKnown RBP12.71□□□□□ -0.37
UBE3B-204ENST00000449510 GGA3Q9NZ52 723 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 TSPAN16Q9UKR8 245 aa12.71□□□□□ -0.37
UBE3B-204ENST00000449510 PAPSS1O43252 624 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-204ENST00000449510 ATXN1P54253 815 aaKnown RBP12.71□□□□□ -0.38
UBE3B-204ENST00000449510 MPP3Q13368 585 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 OLIG2Q13516 323 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 TBCELQ5QJ74 424 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 TMC7Q7Z402 723 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-204ENST00000449510 LMCD1Q9NZU5 365 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 RPL26L1Q9UNX3 145 aaKnown RBP12.71□□□□□ -0.38
UBE3B-204ENST00000449510 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.38
UBE3B-204ENST00000449510 F8W8V4 182 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 AP3B1O00203 1094 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF862O60290 1169 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 MICAL2O94851 1124 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 MAPTP10636 758 aaKnown RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 CA8P35219 290 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 GCOM2Q9BZD3 368 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 CCDC68Q9H2F9 335 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 RMI1Q9H9A7 625 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 POLR1BQ9H9Y6 1135 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 PKD2L2Q9NZM6 624 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 MID2Q9UJV3 735 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 AP4S1Q9Y587 144 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 NWD2Q9ULI1 1742 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 SLIT3O75094 1523 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 UBA6A0AVT1 1052 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-204ENST00000449510 CLOCKO15516 846 aa12.7□□□□□ -0.38
UBE3B-204ENST00000449510 TCEA3O75764 348 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms