RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 FUT4P22083 530 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 GPC3P51654 580 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SMAD1Q15797 465 aaKnown RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CNGA3Q16281 694 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 NADK2Q4G0N4 442 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 KCNT1Q5JUK3 1230 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 TRAF7Q6Q0C0 670 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 EXD1Q8NHP7 514 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 DNAJB3Q8WWF6 145 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 APOPT1Q96IL0 206 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CATSPER2Q96P56 530 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 MRPL1Q9BYD6 325 aaKnown RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 ACSS3Q9H6R3 686 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 XPO7Q9UIA9 1087 aaKnown RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 AKT3Q9Y243 479 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 LZTS1Q9Y250 596 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PDLIM1O00151 329 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PSTPIP1O43586 416 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 NCF2P19878 526 aaPredicted RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PHKA2P46019 1235 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CLCN3P51790 818 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 EFNA5P52803 228 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 GDF10P55107 478 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 NCKAP1LP55160 1127 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 LAMTOR4Q0VGL1 99 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 DMP1Q13316 513 aaPredicted RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 MSLNQ13421 630 aaPredicted RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CYTH1Q15438 398 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 FAM102BQ5T8I3 360 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 TXNRD3NBQ6F5E7 133 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SPOPLQ6IQ16 392 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 LRRC8BQ6P9F7 803 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 FBXL19Q6PCT2 694 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 LRRC8DQ7L1W4 858 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 HPS6Q86YV9 775 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 GALNT4Q8N4A0 578 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 DDX1Q92499 740 aaKnown RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 IFT122Q9HBG6 1241 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PCDHGB4Q9UN71 923 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PCDHGB5Q9Y5G0 923 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PCDHGA4Q9Y5G9 962 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 AK5Q9Y6K8 562 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SIP14410 1827 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 F8VP50 259 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 P4HA2O15460 535 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 AVILO75366 819 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CXCL10P02778 98 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 FAM163BP0C2L3 166 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 MSX2P35548 267 aaPredicted RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 THPOP40225 353 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 ELK3P41970 407 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CBX3Q13185 183 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 NFIL3Q16649 462 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 FAM187BQ17R55 369 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 ANKRD20A4Q4UJ75 823 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 TMEM259Q4ZIN3 620 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 TMEM270Q6UE05 265 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 RNF111Q6ZNA4 994 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SV2AQ7L0J3 742 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SLC9A9Q8IVB4 645 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 KATNAL2Q8IYT4 538 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 LRRC71Q8N4P6 559 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 DCAKDQ8WVC6 231 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 APBB2Q92870 758 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 CCDC28BQ9BUN5 200 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 GCOM2Q9BZD3 368 aaPredicted RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 TMEM134Q9H6X4 195 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 LIN28AQ9H9Z2 209 aaKnown RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 MRPL47Q9HD33 250 aaKnown RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 KCNK4Q9NYG8 393 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 PTTG2Q9NZH5 202 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 SHOC2Q9UQ13 582 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 ZNF510Q9Y2H8 683 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 DTNAQ9Y4J8 743 aa8.37□□□□□ -1.07
LINC00954-202ENST00000449086 HEMK1Q9Y5R4 338 aaPredicted RBP8.37□□□□□ -1.07
LINC00954-202ENST00000449086 UBE4BO95155 1302 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 A0A088AWK7 358 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 NDC80O14777 642 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TGDSO95455 350 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TOP3BO95985 862 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 IQCF3P0C7M6 154 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 CCDC166P0CW27 439 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 UNGP13051 313 aaPredicted RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TNNI1P19237 187 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 PCSK6P29122 969 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 RPL5P46777 297 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 VCPP55072 806 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 MAMLD1Q13495 774 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 HSP90AA5PQ58FG0 334 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ATG16L1Q676U5 607 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 DUS1LQ6P1R4 473 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ZBTB8OSQ8IWT0 167 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 DEFB107AQ8IZN7 70 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms