RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RUSC1Q9BVN2 902 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 DRG1Q9Y295 367 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 POFUT2Q9Y2G5 429 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ABCC4O15439 1325 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CCDC154A6NI56 674 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 M0R036 132 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ZNHIT3Q15649 155 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 C15orf59Q2T9L4 293 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 GLYCTKQ8IVS8 523 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 TBCKQ8TEA7 893 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CNPPD1Q9BV87 410 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 NMRK2Q9NPI5 230 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 HEY2Q9UBP5 337 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MORF4L1Q9UBU8 362 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF639Q9UID6 485 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 N6AMT1Q9Y5N5 214 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MYH7P12883 1935 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CHST10O43529 356 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 TDP2O95551 362 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PVALBP20472 110 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SKIV2L2P42285 1042 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 STRIP1Q5VSL9 837 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 C1orf94Q6P1W5 598 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 DHFR2Q86XF0 187 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MIER2Q8N344 545 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SLC4A11Q8NBS3 891 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MAGEC3Q8TD91 643 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PTCD2Q8WV60 388 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 VCPKMTQ9H867 229 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 COMMD3-BMI1R4GMX3 469 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SYCP2Q9BX26 1530 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PIGBOS1A0A0B4J2F0 54 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 RPL3P39023 403 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PPP2R2BQ00005 443 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 AMPD2Q01433 879 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CHRNDQ07001 517 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SMYD4Q8IYR2 804 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CENPSQ8N2Z9 138 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 OR6Y1Q8NGX8 325 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SCGB3A2Q96PL1 93 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ZSWIM6Q9HCJ5 1215 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MTMR6Q9Y217 621 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MFHAS1Q9Y4C4 1052 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 KCNK1O00180 336 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PLK4O00444 970 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SORBS3O60504 671 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 IFNA10P01566 189 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ACAP1Q15027 740 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 RASA2Q15283 850 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 GPER1Q99527 375 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MIPEPQ99797 713 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF471Q9BX82 626 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 GGT7Q9UJ14 662 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ABT1Q9ULW3 272 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CLIC4Q9Y696 253 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 EIF2AK4Q9P2K8 1649 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 KIF28PB7ZC32 967 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ADSSP30520 456 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 SEPT5Q99719 369 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 DGCR6LQ9BY27 220 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CLCA1A8K7I4 914 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 IFNGP01579 166 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 RARBP10826 455 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PTPN4P29074 926 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PIK3CGP48736 1102 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PRKAA1Q13131 559 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 TOMM20Q15388 145 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 NR6A1Q15406 480 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 OGFRL1Q5TC84 451 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 RNF19BQ6ZMZ0 732 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF554Q86TJ5 538 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 TMPRSS6Q8IU80 811 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PPIL6Q8IXY8 311 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 ADGRE3Q9BY15 652 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 CRISPLD1Q9H336 500 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 TRPV5Q9NQA5 729 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 A0A0G2JMP0 313 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 OR5F1O95221 314 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 MOCS2O96007 188 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-202ENST00000448238 SCP2P22307 547 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 USP46P62068 366 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 SULT1C3Q6IMI6 304 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 OR2L3Q8NG85 312 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 OR4M2Q8NGB6 313 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 ZCCHC2Q9C0B9 1178 aaKnown RBP9.12□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF451Q9Y4E5 1061 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 C9IYK1 514 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 IPO13O94829 963 aaKnown RBP9.12□□□□□ -0.95
NIPBL-202ENST00000448238 ETFBP38117 255 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 GJA9P57773 515 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 SLC34A1Q06495 639 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 MTA1Q13330 715 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 EMC2Q15006 297 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 LRRC41Q15345 812 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 FAM187BQ17R55 369 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 KDM7AQ6ZMT4 941 aa9.12□□□□□ -0.95
NIPBL-202ENST00000448238 OR8H3Q8N146 312 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms