RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SLC26A11Q86WA9 606 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 TTC30AQ86WT1 665 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 PDIK1LQ8N165 341 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 TTC39CQ8N584 583 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 NAT8LQ8N9F0 302 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 TMEM102Q8N9M5 508 aaPredicted RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 FRMD8P1Q9BZ68 369 aaPredicted RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 PARVGQ9HBI0 331 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 CENPBD1B2RD01 187 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 H3BMQ9 156 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 RGS13O14921 159 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 SNRPAP09012 282 aaKnown RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 ZSCAN5DPP0CG00 497 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 KITP10721 976 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 MCF2P10911 925 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 NMT1P30419 496 aaKnown RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 MXI1P50539 228 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 ZNF280AP59817 542 aaPredicted RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 TGFB2P61812 414 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 E2F2Q14209 437 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 SCARA3Q6AZY7 606 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 B3GNT9Q6UX72 402 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 C1orf186Q6ZWK4 172 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 CPXCR1Q8N123 301 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 JDP2Q8WYK2 163 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 CLIP3Q96DZ5 547 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 COG8Q96MW5 612 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 ZNF577Q9BSK1 485 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 PKD2L1Q9P0L9 805 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 BRCA1P38398 1863 aaKnown RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 FAM170AA1A519 330 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 GAS7O60861 476 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 FARP2O94887 1054 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 FAM13AO94988 1023 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 ATE1O95260 518 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 ICAM1P05362 532 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 COX4I1P13073 169 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 TBC1D10BQ4KMP7 808 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 TTC23LQ6PF05 361 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 SLC47A2Q86VL8 602 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 RHPN2Q8IUC4 686 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 COLGALT2Q8IYK4 626 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 MCOLN2Q8IZK6 566 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 LILRA2Q8N149 483 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 ZNF512Q96ME7 567 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 COPS7BQ9H9Q2 264 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 IFT122Q9HBG6 1241 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 MARCOQ9UEW3 520 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 DDX39AO00148 427 aaKnown RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 GNL1P36915 607 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 GALNT2Q10471 571 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 GRSF1Q12849 480 aaKnown RBP eCLIP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 ANKRD26P1Q6NSI1 321 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 SETD3Q86TU7 594 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 FIBCD1Q8N539 461 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 USP33Q8TEY7 942 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 DDX1Q92499 740 aaKnown RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 WNK4Q96J92 1243 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 PKP2Q99959 881 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 FRMD8Q9BZ67 464 aaPredicted RBP19.7■□□□□ 0.74
HMGA1-205ENST00000447654 HOMER2Q9NSB8 354 aa19.7■□□□□ 0.74
HMGA1-205ENST00000447654 GCATO75600 419 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 P4HA1P13674 534 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 EIF2AK2P19525 551 aaKnown RBP19.69■□□□□ 0.74
HMGA1-205ENST00000447654 IREB2P48200 963 aaKnown RBP19.69■□□□□ 0.74
HMGA1-205ENST00000447654 CYP2J2P51589 502 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 PSMC1P62191 440 aaKnown RBP19.69■□□□□ 0.74
HMGA1-205ENST00000447654 FAM209AQ5JX71 171 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 FNBP1LQ5T0N5 605 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 PRAMEF18Q5VWM3 479 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 PDPK2PQ6A1A2 396 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 CDHR3Q6ZTQ4 885 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 FRMD7Q6ZUT3 714 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 FIZ1Q96SL8 496 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 FAM118BQ9BPY3 351 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 WDR11Q9BZH6 1224 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 CXorf21Q9HAI6 301 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 RAVER2Q9HCJ3 691 aaKnown RBP19.69■□□□□ 0.74
HMGA1-205ENST00000447654 GPRC5DQ9NZD1 345 aa19.69■□□□□ 0.74
HMGA1-205ENST00000447654 A0A1B0GTW7 788 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 SLC22A1O15245 554 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CRHR1P34998 444 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 GMPSP49915 693 aaPredicted RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 MCCD1P59942 119 aaPredicted RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 MRPS22P82650 360 aaKnown RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 MGAT5BQ3V5L5 792 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 NBPF12Q5TAG4 269 aaPredicted RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CES4AQ5XG92 561 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 PLA2G4FQ68DD2 849 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 VASH1Q7L8A9 365 aaPredicted RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 MICALL2Q8IY33 904 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CPSF7Q8N684 471 aaKnown RBP19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CALML6Q8TD86 181 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CCDC127Q96BQ5 260 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 TUBA1CQ9BQE3 449 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 MECRQ9BV79 373 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 CDH19Q9H159 772 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 DEFB129Q9H1M3 183 aa19.68■□□□□ 0.74
HMGA1-205ENST00000447654 TUFT1Q9NNX1 390 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms