RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 MCOLN2Q8IZK6 566 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 LGI2Q8N0V4 545 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 CFAP52Q8N1V2 620 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 ATP6V0D2Q8N8Y2 350 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TERB1Q8NA31 727 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TMA16Q96EY4 203 aaKnown RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 PRRX2Q99811 253 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 RAB6CQ9H0N0 254 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TMPRSS4Q9NRS4 437 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.36□□□□□ -0.43
RFC4-208ENST00000447345 STOML2Q9UJZ1 356 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TYW5A2RUC4 315 aaKnown RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 KCNU1A8MYU2 1149 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 F5H5T6 163 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 MFAP3LO75121 409 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 SLC2A3P11169 496 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 KRT3P12035 628 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 TACR2P21452 398 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 GPD1P21695 349 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 RDXP35241 583 aaKnown RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 RFC1P35251 1148 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 CCR3P51677 355 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 NUBP1P53384 320 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 ADKP55263 362 aaKnown RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 GSCP56915 257 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 RPS24P62847 133 aaKnown RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 PPP2R5DQ14738 602 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 GEN1Q17RS7 908 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 FBXO43Q4G163 708 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 SH3PXD2AQ5TCZ1 1133 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 EMC10Q5UCC4 262 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 FAM131BQ86XD5 332 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 MAML2Q8IZL2 1156 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 SYNPOQ8N3V7 929 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 CARNMT1Q8N4J0 409 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 SPEM1Q8N4L4 309 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 CCDC33Q8N5R6 958 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 ALLCQ8N6M5 410 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 HJURPQ8NCD3 748 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 SYN2Q92777 582 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 ZNF653Q96CK0 615 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 ERLEC1Q96DZ1 483 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 BTN2A3PQ96KV6 586 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 DDX50Q9BQ39 737 aaKnown RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 TKTL2Q9H0I9 626 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 ANLNQ9NQW6 1124 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 PRMT8Q9NR22 394 aaPredicted RBP12.35□□□□□ -0.43
RFC4-208ENST00000447345 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 ARHGAP20Q9P2F6 1191 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 MYO1AQ9UBC5 1043 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 ADAMTS1Q9UHI8 967 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
RFC4-208ENST00000447345 CKAP5Q14008 2032 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 ANKRD62A6NC57 917 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 PRRT4C9JH25 899 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 GFRA2O00451 464 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 PAGE1O75459 146 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 ADCY5O95622 1261 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 FTLP02792 175 aaPredicted RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 CISD3P0C7P0 127 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 SP9P0CG40 484 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 WASP42768 502 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 CXCL12P48061 93 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 NUMBP49757 651 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 IRAK1P51617 712 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 ZNF75DP51815 510 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 RPL7AP62424 266 aaKnown RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 PREPLQ4J6C6 727 aaPredicted RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 HEATR6Q6AI08 1181 aaKnown RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 DCUN1D2Q6PH85 259 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 MFN1Q8IWA4 741 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 ZNF513Q8N8E2 541 aaPredicted RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 WFDC5Q8TCV5 224 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 USP33Q8TEY7 942 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 NT5C3BQ969T7 300 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 AZIN2Q96A70 460 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 HHIPQ96QV1 700 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 IER2Q9BTL4 223 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 SIK2Q9H0K1 926 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 KCNH6Q9H252 994 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 WDCPQ9H6R7 721 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 ABHD10Q9NUJ1 306 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 CNOT8Q9UFF9 292 aaKnown RBP12.34□□□□□ -0.43
RFC4-208ENST00000447345 VANGL2Q9ULK5 521 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
RFC4-208ENST00000447345 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms