RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 NCAPHQ15003 741 aa23.15■■□□□ 1.3
LMBR1-211ENST00000444719 ANO6Q4KMQ2 910 aa23.15■■□□□ 1.3
LMBR1-211ENST00000444719 TMEM35BQ8NCS4 154 aa23.15■■□□□ 1.3
LMBR1-211ENST00000444719 NUCKS1Q9H1E3 243 aaKnown RBP23.15■■□□□ 1.3
LMBR1-211ENST00000444719 FAM204AQ9H8W3 233 aa23.15■■□□□ 1.3
LMBR1-211ENST00000444719 ABCB8Q9NUT2 735 aa23.15■■□□□ 1.3
LMBR1-211ENST00000444719 PLXND1Q9Y4D7 1925 aa23.15■■□□□ 1.3
LMBR1-211ENST00000444719 ZBTB24O43167 697 aaPredicted RBP23.14■■□□□ 1.29
LMBR1-211ENST00000444719 MAP3K13O43283 966 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 LRP3O75074 770 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 APOEP02649 317 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 MMEP08473 750 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 P2RY2P41231 377 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 IL12RB1P42701 662 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SNX16P57768 344 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 CDK17Q00537 523 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SLC6A3Q01959 620 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SYCP1Q15431 976 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 CSRP2Q16527 193 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 RSPO4Q2I0M5 234 aaPredicted RBP23.14■■□□□ 1.29
LMBR1-211ENST00000444719 OLFML1Q6UWY5 402 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 CFAP52Q8N1V2 620 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 WFDC5Q8TCV5 224 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 DDX1Q92499 740 aaKnown RBP23.14■■□□□ 1.29
LMBR1-211ENST00000444719 PRICKLE1Q96MT3 831 aaPredicted RBP23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SLC2A13Q96QE2 648 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 DDX50Q9BQ39 737 aaKnown RBP23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SLC6A17Q9H1V8 727 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 HSD3B7Q9H2F3 369 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SMOC1Q9H4F8 434 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 CALCOCO1Q9P1Z2 691 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 THAP10Q9P2Z0 257 aaPredicted RBP23.14■■□□□ 1.29
LMBR1-211ENST00000444719 SIK3Q9Y2K2 1263 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 DCHS1Q96JQ0 3298 aa23.14■■□□□ 1.29
LMBR1-211ENST00000444719 HSF2BPO75031 334 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 IGLV3-25P01717 112 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 GLI1P08151 1106 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 ZNF18P17022 549 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 NDUFV2P19404 249 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 RNASE9P60153 205 aaKnown RBP23.13■■□□□ 1.29
LMBR1-211ENST00000444719 RPS24P62847 133 aaKnown RBP23.13■■□□□ 1.29
LMBR1-211ENST00000444719 CREB5Q02930 508 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 LMNB2Q03252 620 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 ARID5AQ03989 594 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 UBXN1Q04323 297 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 ZNF234Q14588 700 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 SF3A2Q15428 464 aaKnown RBP23.13■■□□□ 1.29
LMBR1-211ENST00000444719 PRR23CQ6ZRP0 262 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 CHST9Q7L1S5 443 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 RNF34Q969K3 372 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 CD248Q9HCU0 757 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 ASNSD1Q9NWL6 643 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 DDIT4Q9NX09 232 aa23.13■■□□□ 1.29
LMBR1-211ENST00000444719 MBD1Q9UIS9 605 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-211ENST00000444719 LGALS16A8MUM7 142 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 ATP1A3P13637 1013 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 CD70P32970 193 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 EIF4HQ15056 248 aaKnown RBP23.12■■□□□ 1.29
LMBR1-211ENST00000444719 MAP7D1Q3KQU3 841 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 C2CD6Q53TS8 623 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 RAP1GAP2Q684P5 730 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 PMS2CLQ68D20 193 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 ERICH1Q86X53 443 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 LGI2Q8N0V4 545 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 HJURPQ8NCD3 748 aaPredicted RBP23.12■■□□□ 1.29
LMBR1-211ENST00000444719 EPS8L1Q8TE68 723 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 CYB5D2Q8WUJ1 264 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 SLC20A1Q8WUM9 679 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 CPA5Q8WXQ8 436 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 SPACA7Q96KW9 195 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 GGA2Q9UJY4 613 aa23.12■■□□□ 1.29
LMBR1-211ENST00000444719 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 TIMM44O43615 452 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 PABPC1P11940 636 aaKnown RBP23.11■■□□□ 1.29
LMBR1-211ENST00000444719 CDH5P33151 784 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-211ENST00000444719 MPLP40238 635 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 DHPSP49366 369 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-211ENST00000444719 NME3Q13232 169 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 MS4A13Q5J8X5 152 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 MPP7Q5T2T1 576 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 SLC26A9Q7LBE3 791 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 C11orf74Q86VG3 221 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 CHSY1Q86X52 802 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 MFN1Q8IWA4 741 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 TMEFF1Q8IYR6 380 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 CARNMT1Q8N4J0 409 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 ATP6V0D2Q8N8Y2 350 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 NEK11Q8NG66 645 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 C18orf8Q96DM3 657 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 BTN2A3PQ96KV6 586 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 SPAG5Q96R06 1193 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 NAT10Q9H0A0 1025 aaKnown RBP23.11■■□□□ 1.29
LMBR1-211ENST00000444719 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.11■■□□□ 1.29
LMBR1-211ENST00000444719 CKAP5Q14008 2032 aa23.11■■□□□ 1.29
LMBR1-211ENST00000444719 TYW5A2RUC4 315 aaKnown RBP23.1■■□□□ 1.29
LMBR1-211ENST00000444719 LRRC10BA6NIK2 292 aa23.1■■□□□ 1.29
LMBR1-211ENST00000444719 PRR5-ARHGAP8B1AHC4 643 aa23.1■■□□□ 1.29
LMBR1-211ENST00000444719 NPC1O15118 1278 aa23.1■■□□□ 1.29
LMBR1-211ENST00000444719 GDF9O60383 454 aa23.1■■□□□ 1.29
LMBR1-211ENST00000444719 SYNCRIPO60506 623 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms