RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 B3GNT5Q9BYG0 378 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 STOML1Q9UBI4 398 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 PCDHB5Q9Y5E4 795 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 KIAA1551Q9HCM1 1747 aa10.9□□□□□ -0.67
TOP3B-210ENST00000444502 C3orf70A6NLC5 250 aaPredicted RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 H0Y626 953 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 MAP3K7O43318 606 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 DNAJC6O75061 913 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 PAEPP09466 180 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 PTPN1P18031 435 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TYK2P29597 1187 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 CCND3P30281 292 aaPredicted RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 NSUN2Q08J23 767 aaKnown RBP eCLIP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 FASTKD3Q14CZ7 662 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TAF5Q15542 800 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TMEM110Q86TL2 294 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 UNC45BQ8IWX7 931 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TMEM130Q8N3G9 435 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 SIKE1Q9BRV8 207 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 SRRDQ9UH36 339 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 SMCHD1A6NHR9 2005 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 COQ9O75208 318 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TMCC1O94876 653 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 AMPD1P23109 780 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 RPL10AP62906 217 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ISLR2Q6UXK2 745 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 FAM183BPQ6ZVS7 135 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 PIGZQ86VD9 579 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 CACUL1Q86Y37 369 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 CCNJLQ8IV13 435 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 NDUFAF2Q8N183 169 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ZCCHC9Q8N567 271 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 DDI1Q8WTU0 396 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 DDX1Q92499 740 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 GRAMD1AQ96CP6 724 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ZMAT2Q96NC0 199 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TTC1Q99614 292 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ELOVL4Q9GZR5 314 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 DSEQ9UL01 958 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 H7C4K7 107 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 KCNK1O00180 336 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 GYG2O15488 501 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TSPAN3O60637 253 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 MTA2O94776 668 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ERBB2P04626 1255 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 DRD4P21917 467 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 TARSP26639 723 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 AVPR1AP37288 418 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 NRLP54845 237 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 RAD51Q06609 339 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ELAVL2Q12926 359 aaKnown RBP10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ANO4Q32M45 955 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 ATG16L1Q676U5 607 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 LRRC6Q86X45 466 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 HIPK4Q8NE63 616 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 SHOC2Q9UQ13 582 aa10.89□□□□□ -0.67
TOP3B-210ENST00000444502 LSM1O15116 133 aaKnown RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 TSPAN1O60635 241 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 GPC4O75487 556 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 C22orf31O95567 290 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 CYP2F1P24903 491 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 ACLYP53396 1101 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 LRRC36Q1X8D7 754 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 PGBD3Q8N328 593 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 RIBC1Q8N443 379 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 TMEM237Q96Q45 408 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 PCYT2Q99447 389 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 PDZD7Q9H5P4 517 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 DMAP1Q9NPF5 467 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 NRAPQ86VF7 1730 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 LRCH4O75427 683 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 SNAI1O95863 264 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 AMHP03971 560 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 FGFR1P11362 822 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 IGFBP4P22692 258 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 C1QTNF12Q5T7M4 302 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 PPP1R26Q5T8A7 1209 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 CDC26Q8NHZ8 85 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 CERS4Q9HA82 394 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 HMGXB4Q9UGU5 601 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 SPTLC1O15269 473 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 JCHAINP01591 159 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 CPA2P48052 419 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 GJA8P48165 433 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 DPYSL3Q14195 570 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 PDK1Q15118 436 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 RBM23Q86U06 439 aaKnown RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 CCNYL1Q8N7R7 359 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 GLIS1Q8NBF1 620 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 B3GALNT2Q8NCR0 500 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 SMARCD1Q96GM5 515 aa10.88□□□□□ -0.67
TOP3B-210ENST00000444502 ZBED3Q96IU2 234 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 MRPL45Q9BRJ2 306 aaKnown RBP10.88□□□□□ -0.67
TOP3B-210ENST00000444502 ATXN3LQ9H3M9 355 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms