RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DTLQ9NZJ0 730 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CWC15Q9P013 229 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 VPS18Q9P253 973 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 OR12D3Q9UGF7 316 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 STOML2Q9UJZ1 356 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DNPEPQ9ULA0 475 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RIMKLBQ9ULI2 386 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SMG5Q9UPR3 1016 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 USTQ9Y2C2 406 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF510Q9Y2H8 683 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 AAR2Q9Y312 384 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SNX24Q9Y343 169 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ARIH1Q9Y4X5 557 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 INSL6Q9Y581 213 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TEX264Q9Y6I9 313 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF638Q14966 1978 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DOCK4Q8N1I0 1966 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CHD5Q8TDI0 1954 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 VWA8A3KMH1 1905 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PCNTO95613 3336 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 IQANK1A0A1B0GTG1 560 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TCRBV7S2A1N4TA0A589 114 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MTMR11A4FU01 709 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SDR42E2A6NKP2 422 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MEIS3P2A8K0S8 358 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM110-MUSTN1A8MSY1 372 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 C5orf67F2Z3F1 127 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SGK1O00141 431 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TULP2O00295 520 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 EEF2KO00418 725 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MATN3O15232 486 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TM9SF1O15321 606 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RGS16O15492 202 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PRPF4O43172 522 aaKnown RBP eCLIP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LILRB3O75022 631 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ATP2C2O75185 946 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CLDN11O75508 207 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ZMYND10O75800 440 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ANXA9O76027 345 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 BEST1O76090 585 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ZWINTO95229 277 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PAPSS2O95340 614 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 AP2A1O95782 977 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 OLFM2O95897 454 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 APOEP02649 317 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TFRCP02786 760 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 POLBP06746 335 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM153BP0C7A2 387 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SRGAP2BP0DMP2 458 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KRT10P13645 584 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LCP1P13796 627 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PECAM1P16284 738 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 HOXB8P17481 243 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ERCC2P18074 760 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 NR1D1P20393 614 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CD9P21926 228 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 BDNFP23560 247 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PRKCHP24723 683 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 STX2P32856 288 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RPL22P35268 128 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ATP5C1P36542 298 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PBX3P40426 434 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SLC26A3P40879 764 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MDH1P40925 334 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 GARSP41250 739 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 BRCC3P46736 316 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 OR1G1P47890 313 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KCNJ1P48048 391 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CTCFP49711 727 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RGS7P49802 495 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 NDUFV1P49821 464 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RENBPP51606 427 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 AFF1P51825 1210 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 GEMIN4P57678 1058 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RNASE9P60153 205 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TPI1P60174 286 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 NAA20P61599 178 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 YWHAGP61981 247 aaKnown RBP eCLIP2.91□□□□□ -1.941e-7■■■■■ 27.1
LINC00393-201ENST00000443621 PPP2R2AP63151 447 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 IFI35P80217 286 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ATP11AP98196 1134 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TLE2Q04725 743 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CDK18Q07002 472 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SLC20A2Q08357 652 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 NSUN2Q08J23 767 aaKnown RBP eCLIP2.91□□□□□ -1.942e-11■■□□□ 12.9
LINC00393-201ENST00000443621 IFFO1Q0D2I5 559 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 GPS1Q13098 491 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PPIGQ13427 754 aaKnown RBP eCLIP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SERINC3Q13530 473 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PRPSAP1Q14558 356 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KCNJ11Q14654 390 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 VEPH1Q14D04 833 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 E2F5Q15329 346 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 UAP1Q16222 522 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 INSCQ1MX18 579 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 C15orf59Q2T9L4 293 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KRT71Q3SY84 523 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM153CQ494X1 144 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ATP13A4Q4VNC1 1196 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms