RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SLC30A9Q6PML9 568 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 RNF111Q6ZNA4 994 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 TMPRSS6Q8IU80 811 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 TMEM216Q9P0N5 145 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 GJD2Q9UKL4 321 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 FIS1Q9Y3D6 152 aa13.53□□□□□ -0.24
SLC48A1-201ENST00000442218 CHADO15335 359 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 B4GALT4O60513 344 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 OPHN1O60890 802 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 RNASEH1O60930 286 aaKnown RBP13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 AMHP03971 560 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 ARSAP15289 507 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 LMO2P25791 158 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 PDE1CQ14123 709 aaPredicted RBP13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 RASIP1Q5U651 963 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 ATG16L1Q676U5 607 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 MAVSQ7Z434 540 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 MAP7D3Q8IWC1 876 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 PLD6Q8N2A8 252 aaKnown RBP13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 ACVR1CQ8NER5 493 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 BCO2Q9BYV7 579 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 WWP1Q9H0M0 922 aa13.52□□□□□ -0.24
SLC48A1-201ENST00000442218 SCN4AP35499 1836 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 A6NJR5 290 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 CFLARO15519 480 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 ATP9BO43861 1147 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 TCN1P20061 433 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 PEX2P28328 305 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 SERPINB5P36952 375 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 GLRBP48167 497 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 SLC1A6P48664 564 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 IRF9Q00978 393 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 MXD4Q14582 209 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 KCTD2Q14681 263 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 PRAMEF19Q5SWL8 479 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 HEATR6Q6AI08 1181 aaKnown RBP13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 KDELC2Q7Z4H8 507 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 SNX31Q8N9S9 440 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 AGAP2Q99490 1192 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 SSU72Q9NP77 194 aaKnown RBP13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 EMCNQ9ULC0 261 aa13.52□□□□□ -0.25
SLC48A1-201ENST00000442218 EDNRBP24530 442 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PSMB4P28070 264 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PAPOLAP51003 745 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 ASPHQ12797 758 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 CDC16Q13042 620 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 TAZQ16635 292 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 ARMC3Q5W041 872 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 GSDMBQ8TAX9 411 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 ZNF398Q8TD17 642 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 EBNA1BP2Q99848 306 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 WDR55Q9H6Y2 383 aaPredicted RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 SYBUQ9NX95 663 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 SNTG2Q9NY99 539 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 AP4E1Q9UPM8 1137 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 LMNAP02545 664 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 ACAT1P24752 427 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 TYK2P29597 1187 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 AVPR1AP37288 418 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 SFT2D3Q587I9 215 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PPM1LQ5SGD2 360 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PTAR1Q7Z6K3 402 aaPredicted RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 RASSF3Q86WH2 238 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 GBP5Q96PP8 586 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 KCTD15Q96SI1 283 aaPredicted RBP13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 CCDC106Q9BWC9 280 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 VCXQ9H320 206 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 KCNK4Q9NYG8 393 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PCDHGB4Q9UN71 923 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 PCDHGB5Q9Y5G0 923 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 SNX10Q9Y5X0 201 aa13.51□□□□□ -0.25
SLC48A1-201ENST00000442218 A0A088AWK7 358 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 CLDN5O00501 218 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 AIM2O14862 343 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 PGM3O95394 542 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 AP3M2P53677 418 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 AQP4P55087 323 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 SARNPP82979 210 aaKnown RBP13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 LGSNQ5TDP6 509 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 OLFML1Q6UWY5 402 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 COLGALT1Q8NBJ5 622 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 FZD8Q9H461 694 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 DTLQ9NZJ0 730 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 SIRPGQ9P1W8 387 aa13.5□□□□□ -0.25
SLC48A1-201ENST00000442218 WDR35Q9P2L0 1181 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms