RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CCND2P30279 289 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 SFSWAPQ12872 951 aaKnown RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF280CQ8ND82 737 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 GSDMBQ8TAX9 411 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PPP1R36Q96LQ0 422 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 CPXM1Q96SM3 734 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 STN1Q9H668 368 aaKnown RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 RSAD1Q9HA92 442 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 FAM159BA6NKW6 160 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 TPP1O14773 563 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 TRUB2O95900 331 aaKnown RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 SERPINE1P05121 402 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 KLF10Q13118 480 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 CBX3Q13185 183 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 APOFQ13790 326 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PDE1CQ14123 709 aaPredicted RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 ADGRE1Q14246 886 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 MTMR12Q9C0I1 747 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 DNAJC28Q9NX36 388 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 BOLA2-SMG1P6H3BVE0 249 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 CFLARO15519 480 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PLIN3O60664 434 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 ALDOAP04075 364 aaKnown RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 XRCC1P18887 633 aaPredicted RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 SFNP31947 248 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 NR1H2P55055 460 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PKNOX1P55347 436 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 FLOT2Q14254 428 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 LPIN1Q14693 890 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PPM1JQ5JR12 505 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PPM1LQ5SGD2 360 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 CCDC60Q8IWA6 550 aaPredicted RBP20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PGBD4Q96DM1 585 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF518BQ9C0D4 1074 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 PLK2Q9NYY3 685 aa20.86■□□□□ 0.93
SHOX2-203ENST00000441443 LRRIQ4A6NIV6 560 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 DGKIO75912 1065 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 ASS1P00966 412 aaKnown RBP20.85■□□□□ 0.93
SHOX2-203ENST00000441443 TNFSF9P41273 254 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 THOP1P52888 689 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 VSIG10LQ86VR7 867 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 NUP93Q8N1F7 819 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF513Q8N8E2 541 aaPredicted RBP20.85■□□□□ 0.93
SHOX2-203ENST00000441443 USP13Q92995 863 aaPredicted RBP20.85■□□□□ 0.93
SHOX2-203ENST00000441443 CDRT15Q96T59 188 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 PKP2Q99959 881 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 KLC2Q9H0B6 622 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 RIMS3Q9UJD0 308 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 PIK3R2O00459 728 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 EDN1P05305 212 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 STT3AP46977 705 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 CRADDP78560 199 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 SLC9B1Q4ZJI4 515 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 APBB2Q92870 758 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 SIGLEC10Q96LC7 697 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 SDCBP2Q9H190 292 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 DHX33Q9H6R0 707 aaKnown RBP20.85■□□□□ 0.93
SHOX2-203ENST00000441443 COG4Q9H9E3 785 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF358Q9NW07 568 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 PIH1D1Q9NWS0 290 aaKnown RBP20.85■□□□□ 0.93
SHOX2-203ENST00000441443 STK39Q9UEW8 545 aa20.85■□□□□ 0.93
SHOX2-203ENST00000441443 DGAT1O75907 488 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 ZBED1O96006 694 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 PTPRAP18433 802 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 TMEM132BQ14DG7 1078 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 CDO1Q16878 200 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 EEPD1Q7L9B9 569 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 MCPH1Q8NEM0 835 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 GRIN3AQ8TCU5 1115 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF512Q96ME7 567 aaPredicted RBP20.84■□□□□ 0.93
SHOX2-203ENST00000441443 FAF1Q9UNN5 650 aaPredicted RBP20.84■□□□□ 0.93
SHOX2-203ENST00000441443 GOLGA8QA0A0J9YX86 632 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 GOLGA8OA6NCC3 632 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 GOLGA8NF8WBI6 632 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 XPO1O14980 1071 aaKnown RBP20.84■□□□□ 0.93
SHOX2-203ENST00000441443 ERBB2P04626 1255 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 POLR2BP30876 1174 aaKnown RBP20.84■□□□□ 0.93
SHOX2-203ENST00000441443 DDI1Q8WTU0 396 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 EBNA1BP2Q99848 306 aaKnown RBP20.84■□□□□ 0.93
SHOX2-203ENST00000441443 GPATCH2LQ9NWQ4 482 aa20.84■□□□□ 0.93
SHOX2-203ENST00000441443 RGS20O76081 388 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 PRKCEQ02156 737 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 FSTL1Q12841 308 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 NRF1Q16656 503 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 MAPK15Q8TD08 544 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 NSUN6Q8TEA1 469 aaKnown RBP20.83■□□□□ 0.93
SHOX2-203ENST00000441443 JPH1Q9HDC5 661 aaPredicted RBP20.83■□□□□ 0.93
SHOX2-203ENST00000441443 PDLIM7Q9NR12 457 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 TMEM216Q9P0N5 145 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 K7ERI5 159 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 NOP56O00567 594 aaKnown RBP20.83■□□□□ 0.93
SHOX2-203ENST00000441443 STBD1O95210 358 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 SERPINB9P50453 376 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 ABCE1P61221 599 aaKnown RBP20.83■□□□□ 0.93
SHOX2-203ENST00000441443 MS4A2Q01362 244 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 CASC4Q6P4E1 433 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 TRIML2Q8N7C3 387 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 ZNF781Q8N8C0 355 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 BHLHE22Q8NFJ8 381 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms