RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 AK5Q9Y6K8 562 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 COL5A1P20908 1838 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PCDH15Q96QU1 1955 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ARID2Q68CP9 1835 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 KIAA1549LQ6ZVL6 1849 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 TCAF2A6NFQ2 919 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 MEIS3P2A8K0S8 358 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 TISP43B9A030 160 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 PYCARD-AS1I3L0S3 204 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 K7ENM7 598 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 PSMA7O14818 248 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 DCLK1O15075 740 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 EIF3DO15371 548 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GCNT3O95395 438 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 POMCP01189 267 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 LRG1P02750 347 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 HOXC13P31276 330 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 TRHRP34981 398 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 EIF2S3P41091 472 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 NAMPTP43490 491 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GPC3P51654 580 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 DGKEP52429 567 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GTF2BQ00403 316 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 FCHO2Q0JRZ9 810 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 KNOP1Q1ED39 458 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 HSP90AA4PQ58FG1 418 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 SPDYCQ5MJ68 293 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 L1TD1Q5T7N2 865 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 SPATA1Q5VX52 437 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 LMBRD2Q68DH5 695 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 EFCAB12Q6NXP0 572 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 SLC39A4Q6P5W5 647 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 LRFN4Q6PJG9 635 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 ARMCX6Q7L4S7 300 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 APTXQ7Z2E3 356 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 MRPL10Q7Z7H8 261 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GLRX5Q86SX6 157 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GGNQ86UU5 652 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF513Q8N8E2 541 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 PRPF31Q8WWY3 499 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 KIFAP3Q92845 792 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 KCNN1Q92952 543 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 EXOC4Q96A65 974 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 DRC1Q96MC2 740 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 TMEM209Q96SK2 561 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 NTPCRQ9BSD7 190 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GTPBP2Q9BX10 602 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 GPR88Q9GZN0 384 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 INTS13Q9NVM9 706 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 LARSQ9P2J5 1176 aaKnown RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 ARHGAP28Q9P2N2 729 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 SUCLA2Q9P2R7 463 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 ADAM28Q9UKQ2 775 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 TRAF3IP3Q9Y228 551 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 PCDHB2Q9Y5E7 798 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 MYLKQ15746 1914 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 SF3B1O75533 1304 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTPN4-206ENST00000441089 PDZD2O15018 2839 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 ABCA2Q9BZC7 2435 aa5.12□□□□□ -1.59
PTPN4-206ENST00000441089 HELZP42694 1942 aaKnown RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SVILO95425 2214 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 WDR27A2RRH5 827 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PRAMEF27A3QJZ7 478 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 ANKRD33BA6NCL7 494 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 LRRIQ4A6NIV6 560 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CCDC169A6NNP5 214 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SMTNL1A8MU46 457 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 HEPACAM2A8MVW5 462 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 BECN2A8MW95 431 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 WASH4PA8MWX3 477 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 ANKRD63C9JTQ0 380 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CLIC2O15247 247 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CFIP05156 583 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SYPP08247 313 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SERPINF2P08697 491 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 HLA-EP13747 358 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CD59P13987 128 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 FGFR4P22455 802 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 ADSSP30520 456 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PPP1R2P41236 205 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 VIPR2P41587 438 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SOX9P48436 509 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 AMPD2Q01433 879 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 DSC1Q08554 894 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 LAMTOR4Q0VGL1 99 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 GRSF1Q12849 480 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 DMP1Q13316 513 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 RAB33AQ14088 237 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 INPP5AQ14642 412 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PSMD5Q16401 504 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 DUOXA1Q1HG43 343 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 FBXO43Q4G163 708 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 ARHGAP29Q52LW3 1261 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CYP4A22Q5TCH4 519 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CDCA2Q69YH5 1023 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PKN3Q6P5Z2 889 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 FOXR2Q6PJQ5 311 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SARM1Q6SZW1 724 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PCSK4Q6UW60 755 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms