RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GALNTL6Q49A17 601 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 TBC1D3GQ6DHY5 549 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 TBC1D3CQ6IPX1 549 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 RINLQ6ZS11 566 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 C16orf71Q8IYS4 520 aaPredicted RBP5.55□□□□□ -1.52
PFDN4-202ENST00000441080 TBC1D3Q8IZP1 549 aaPredicted RBP5.55□□□□□ -1.52
PFDN4-202ENST00000441080 TRMT61AQ96FX7 289 aaKnown RBP5.55□□□□□ -1.52
PFDN4-202ENST00000441080 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 NUAK2Q9H093 628 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 SEPSECSQ9HD40 501 aaKnown RBP5.55□□□□□ -1.52
PFDN4-202ENST00000441080 ARL8BQ9NVJ2 186 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 ASNSD1Q9NWL6 643 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 NDUFAF4Q9P032 175 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 MAFFQ9ULX9 164 aa5.55□□□□□ -1.52
PFDN4-202ENST00000441080 HEMK1Q9Y5R4 338 aaPredicted RBP5.55□□□□□ -1.52
PFDN4-202ENST00000441080 SIRT4Q9Y6E7 314 aaPredicted RBP5.55□□□□□ -1.52
PFDN4-202ENST00000441080 COL11A2P13942 1736 aaPredicted RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 PRYO14603 147 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 ALDOAP04075 364 aaKnown RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 PRKCGP05129 697 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 PEPDP12955 493 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 PPM1FP49593 454 aaPredicted RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 RBM6P78332 1123 aaKnown RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 TLE3Q04726 772 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 SLC10A2Q12908 348 aaPredicted RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 TBRG1Q3YBR2 411 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 DNAJC10Q8IXB1 793 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 MYRIPQ8NFW9 859 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 OR6Y1Q8NGX8 325 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 PNISRQ8TF01 805 aaKnown RBP5.54□□□□□ -1.52
PFDN4-202ENST00000441080 THAP4Q8WY91 577 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 ITM2CQ9NQX7 267 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 KIF17Q9P2E2 1029 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 SLC12A4Q9UP95 1085 aa5.54□□□□□ -1.52
PFDN4-202ENST00000441080 MBD3L5A6NJ08 208 aaPredicted RBP5.53□□□□□ -1.52
PFDN4-202ENST00000441080 C3orf70A6NLC5 250 aaPredicted RBP5.53□□□□□ -1.52
PFDN4-202ENST00000441080 HOXD12P35452 270 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 ADD2P35612 726 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 STAT6P42226 847 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 ARL4CP56559 192 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 CUL4BQ13620 913 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 ADCK5Q3MIX3 580 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 DGAT2L7PQ6IED9 249 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 MOGAT3Q86VF5 341 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 SUGP1Q8IWZ8 645 aaKnown RBP5.53□□□□□ -1.52
PFDN4-202ENST00000441080 LAS2Q8IYD9 372 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 SRFBP1Q8NEF9 429 aaKnown RBP5.53□□□□□ -1.52
PFDN4-202ENST00000441080 ASB12Q8WXK4 309 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 GOLGA1Q92805 767 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 ZNF764Q96H86 408 aaPredicted RBP5.53□□□□□ -1.52
PFDN4-202ENST00000441080 C5orf34Q96MH7 638 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 CRAMP1Q96RY5 1269 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 SENP7Q9BQF6 1050 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 EFHD1Q9BUP0 239 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 TRIM2Q9C040 744 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 PRDM16Q9HAZ2 1276 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 LUZP4Q9P127 313 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 GPR52Q9Y2T5 361 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 DGKBQ9Y6T7 804 aa5.53□□□□□ -1.52
PFDN4-202ENST00000441080 C16orf96A6NNT2 1141 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 PPFIA2O75334 1257 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 FAM155BO75949 473 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 KRT38O76015 456 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 CYP3A4P08684 503 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 FOXL2P58012 376 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 NANOS3P60323 173 aaKnown RBP5.52□□□□□ -1.53
PFDN4-202ENST00000441080 PPFIA1Q13136 1202 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 BIRC3Q13489 604 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 ANKRD45Q5TZF3 282 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 FTSJ3Q8IY81 847 aaKnown RBP5.52□□□□□ -1.53
PFDN4-202ENST00000441080 CPXCR1Q8N123 301 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 C8orf58Q8NAV2 365 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 SPPL3Q8TCT6 385 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 CSGALNACT1Q8TDX6 532 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 AFG1LQ8WV93 481 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 ZNF845Q96IR2 970 aaPredicted RBP5.52□□□□□ -1.53
PFDN4-202ENST00000441080 GPR78Q96P69 363 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 POLR3GLQ9BT43 218 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.52□□□□□ -1.53
PFDN4-202ENST00000441080 KCND3Q9UK17 655 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 BAG5Q9UL15 447 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 LZTS1Q9Y250 596 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 B3GNT3Q9Y2A9 372 aa5.52□□□□□ -1.53
PFDN4-202ENST00000441080 FNDC1Q4ZHG4 1894 aaPredicted RBP5.51□□□□□ -1.53
PFDN4-202ENST00000441080 AGAP5A6NIR3 686 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 E7EVH7 732 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 HEXIM1O94992 359 aaKnown RBP5.51□□□□□ -1.53
PFDN4-202ENST00000441080 KAT7O95251 611 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 SFPQP23246 707 aaKnown RBP eCLIP5.51□□□□□ -1.53
PFDN4-202ENST00000441080 TACR3P29371 465 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 CCT5P48643 541 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 AARSP49588 968 aaKnown RBP eCLIP5.51□□□□□ -1.53
PFDN4-202ENST00000441080 RCAN1P53805 252 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 PDCLQ13371 301 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 ZNF268Q14587 947 aaPredicted RBP5.51□□□□□ -1.53
PFDN4-202ENST00000441080 SEC23BQ15437 767 aa5.51□□□□□ -1.53
PFDN4-202ENST00000441080 GLE1Q53GS7 698 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms